RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ST6GALNAC4Q9H4F1 302 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 RPF1Q9H9Y2 349 aaKnown RBP14.06□□□□□ -0.16
VRK3-203ENST00000424804 SLC27A5Q9Y2P5 690 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 A0A087X0B3 334 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 TULP1O00294 542 aaPredicted RBP14.05□□□□□ -0.16
VRK3-203ENST00000424804 PPP1R37O75864 691 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 SOAT2O75908 522 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 TGM1P22735 817 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 ADSSP30520 456 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 GDI1P31150 447 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 WNT7BP56706 349 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 PPP2R3AQ06190 1150 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 MYBPC2Q14324 1141 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 KYAT1Q16773 422 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 IQCEQ6IPM2 695 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 ZC3H14Q6PJT7 736 aaKnown RBP14.05□□□□□ -0.16
VRK3-203ENST00000424804 ERMP1Q7Z2K6 904 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 KIAA2013Q8IYS2 634 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 LEMD2Q8NC56 503 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 ZSWIM2Q8NEG5 633 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 RUBCNQ92622 972 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 OXCT2Q9BYC2 517 aaPredicted RBP14.05□□□□□ -0.16
VRK3-203ENST00000424804 CHRDQ9H2X0 955 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 BRD9Q9H8M2 597 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 ASAH2Q9NR71 780 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 TBC1D7Q9P0N9 293 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 ZDHHC9Q9Y397 364 aa14.05□□□□□ -0.16
VRK3-203ENST00000424804 NUP210Q8TEM1 1887 aaPredicted RBP14.05□□□□□ -0.16
VRK3-203ENST00000424804 KIF26AQ9ULI4 1882 aaPredicted RBP14.04□□□□□ -0.16
VRK3-203ENST00000424804 A0A1W2PRU2 124 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 MYMKA6NI61 221 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 HEPACAM2A8MVW5 462 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 HNRNPDLO14979 420 aaKnown RBP14.04□□□□□ -0.16
VRK3-203ENST00000424804 CHRNB1P11230 501 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 SCP2P22307 547 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 ACOT2P49753 483 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 KRT85P78386 507 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 FCHO2Q0JRZ9 810 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 ATL3Q6DD88 541 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 OVOS1Q6IE37 1185 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 SHC4Q6S5L8 630 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 DSTYKQ6XUX3 929 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 ZNF720Q7Z2F6 126 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 DNAJB7Q7Z6W7 309 aaPredicted RBP14.04□□□□□ -0.16
VRK3-203ENST00000424804 LRRTM3Q86VH5 581 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 SFR1Q86XK3 245 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 GPIHBP1Q8IV16 184 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 CD302Q8IX05 232 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 EFCAB13Q8IY85 973 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 DEPDC1BQ8WUY9 529 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 IRF7Q92985 503 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 MSTO1Q9BUK6 570 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 IL21Q9HBE4 155 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 ZSCAN32Q9NX65 697 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 FAM13BQ9NYF5 915 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 PCDHA7Q9UN72 937 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 DERAQ9Y315 318 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 PCDHGA2Q9Y5H1 932 aa14.04□□□□□ -0.16
VRK3-203ENST00000424804 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
VRK3-203ENST00000424804 MORC2Q9Y6X9 1032 aaPredicted RBP14.04□□□□□ -0.16
VRK3-203ENST00000424804 NCOR2Q9Y618 2525 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 MAN2B1O00754 1011 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 KINO60870 393 aaKnown RBP14.03□□□□□ -0.16
VRK3-203ENST00000424804 CDR1P51861 262 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 MLLT6P55198 1093 aaPredicted RBP14.03□□□□□ -0.16
VRK3-203ENST00000424804 KCNA1Q09470 495 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 ELMOD1Q8N336 334 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 CXorf38Q8TB03 319 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 PSMG2Q969U7 264 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 DNAJC19Q96DA6 116 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 GPR88Q9GZN0 384 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 ZCWPW1Q9H0M4 648 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 EPC1Q9H2F5 836 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 ASB7Q9H672 318 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 LMAN1LQ9HAT1 526 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 DLL3Q9NYJ7 618 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 HSFX1Q9UBD0 423 aa14.03□□□□□ -0.16
VRK3-203ENST00000424804 NDRG2Q9UN36 371 aaKnown RBP14.03□□□□□ -0.16
VRK3-203ENST00000424804 NCAM2O15394 837 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 POLR2DO15514 142 aaKnown RBP14.02□□□□□ -0.17
VRK3-203ENST00000424804 XPOTO43592 962 aaKnown RBP14.02□□□□□ -0.17
VRK3-203ENST00000424804 ATF6P18850 670 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 WEE1P30291 646 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 HOXC13P31276 330 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 POU5F1Q01860 360 aaKnown RBP14.02□□□□□ -0.17
VRK3-203ENST00000424804 TMEM132DQ14C87 1099 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 TXNDC11Q6PKC3 985 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 TMEM150AQ86TG1 271 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 ARID3BQ8IVW6 561 aaPredicted RBP14.02□□□□□ -0.17
VRK3-203ENST00000424804 FAM3CQ92520 227 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 LPIN3Q9BQK8 851 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 MRPL44Q9H9J2 332 aaKnown RBP14.02□□□□□ -0.17
VRK3-203ENST00000424804 C2orf42Q9NWW7 574 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 MRPS17Q9Y2R5 130 aaKnown RBP14.02□□□□□ -0.17
VRK3-203ENST00000424804 C2CD2Q9Y426 696 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 ASB3Q9Y575 518 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 ATP6V1DQ9Y5K8 247 aa14.02□□□□□ -0.17
VRK3-203ENST00000424804 PIAS3Q9Y6X2 628 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms