RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 THEGQ9P2T0 379 aa27.23■■□□□ 1.95
TSPAN3-203ENST00000424443 TBX10O75333 385 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 ASS1P00966 412 aaKnown RBP27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 SPATA31D3P0C874 917 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 MYL5Q02045 173 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 KCNH2Q12809 1159 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 WDR44Q5JSH3 913 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 SPATA31D4Q6ZUB0 917 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 PI4K2AQ9BTU6 479 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 PLEKHA4Q9H4M7 779 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 PRDM6Q9NQX0 595 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.22■■□□□ 1.956e-6■■■■■ 48.1
TSPAN3-203ENST00000424443 MAN1C1Q9NR34 630 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 REV3LO60673 3130 aa27.22■■□□□ 1.95
TSPAN3-203ENST00000424443 AFPP02771 609 aaKnown RBP27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 ELF1P32519 619 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 DLX2Q07687 328 aaPredicted RBP27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 HSP90AA4PQ58FG1 418 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 LIN9Q5TKA1 542 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 ANKRD54Q6NXT1 300 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 KREMEN2Q8NCW0 462 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 ZNF461Q8TAF7 563 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 SNX25Q9H3E2 840 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 POLIQ9UNA4 740 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 TSC2P49815 1807 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 H3BQ06 376 aaPredicted RBP27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 HOXB8P17481 243 aaPredicted RBP27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 LTBRP36941 435 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 NOP14P78316 857 aaKnown RBP27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 TSPY1Q01534 308 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 ZSCAN23Q3MJ62 389 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 TPGS2Q68CL5 300 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 LILRA6Q6PI73 481 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 SCARA5Q6ZMJ2 495 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 IRF2BP1Q8IU81 584 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 HDAC7Q8WUI4 952 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 ELMO3Q96BJ8 720 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 SAMSN1Q9NSI8 373 aaKnown RBP27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 CLEC1BQ9P126 229 aa27.21■■□□□ 1.95
TSPAN3-203ENST00000424443 COL6A3P12111 3177 aa27.2■■□□□ 1.95
TSPAN3-203ENST00000424443 PLXNA3P51805 1871 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 WDR27A2RRH5 827 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 P4HA2O15460 535 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 TACC1O75410 805 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 FAM163BP0C2L3 166 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 PCSK1P29120 753 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 AAK1Q2M2I8 961 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 SPOPLQ6IQ16 392 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 OR6B3Q8NGW1 331 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 COQ4Q9Y3A0 265 aa27.2■■□□□ 1.94
TSPAN3-203ENST00000424443 KCNJ18B7U540 433 aa27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 OR4Q2P0C623 313 aa27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 WARSP23381 471 aaKnown RBP27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 KCNJ12Q14500 433 aa27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 CLUL1Q15846 466 aa27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 DCP1BQ8IZD4 617 aaKnown RBP27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 ACBD6Q9BR61 282 aa27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 CD207Q9UJ71 328 aa27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 FBXW11Q9UKB1 542 aa27.19■■□□□ 1.94
TSPAN3-203ENST00000424443 PRKCSHP14314 528 aaPredicted RBP27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 GNL1P36915 607 aaPredicted RBP27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 GPR17Q13304 367 aa27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 LIMS2Q7Z4I7 341 aa27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 OR10T2Q8NGX3 314 aa27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 SEMA4DQ92854 862 aa27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 SFXN1Q9H9B4 322 aa27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 AFF4Q9UHB7 1163 aaKnown RBP27.18■■□□□ 1.94
TSPAN3-203ENST00000424443 GABRDO14764 452 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 PMM2O15305 246 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 ABLIM3O94929 683 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 ATF2P15336 505 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 EEF1GP26641 437 aaKnown RBP27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 TFF2Q03403 129 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 ADCY1Q08828 1119 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 MAN2A1Q16706 1144 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 SLC39A12Q504Y0 691 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 CCDC149Q6ZUS6 474 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 OSTM1Q86WC4 334 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 AOPEPQ8N6M6 819 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 KBTBD7Q8WVZ9 684 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 TMEM209Q96SK2 561 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 RTP3Q9BQQ7 232 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 MRPL45Q9BRJ2 306 aaKnown RBP27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 APOL5Q9BWW9 433 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 NIF3L1Q9GZT8 377 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 ZCWPW1Q9H0M4 648 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 SMYD3Q9H7B4 428 aa27.17■■□□□ 1.94
TSPAN3-203ENST00000424443 SMTNL1A8MU46 457 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 PES1O00541 588 aaKnown RBP27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 PRRG1O14668 218 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 TPM2P07951 284 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 ACAT1P24752 427 aaKnown RBP27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 ZNF165P49910 485 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 TCP11X2Q5H9J9 407 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 CES5AQ6NT32 575 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 RNF19BQ6ZMZ0 732 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 ANKRD20A12PQ8NF67 263 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 MSLNLQ96KJ4 702 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 PGLYRP2Q96PD5 576 aa27.16■■□□□ 1.94
TSPAN3-203ENST00000424443 BPIFA3Q9BQP9 254 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms