RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TRABD2AQ86V40 505 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 NCAPG2Q86XI2 1143 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 ATL2Q8NHH9 583 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 STK32AQ8WU08 396 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 TEX13BQ9BXU2 312 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 DENND2DQ9H6A0 471 aaPredicted RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 CYP39A1Q9NYL5 469 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 PI4K2BG5E9Z4 385 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 IPO5O00410 1097 aaKnown RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 ADSSP30520 456 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 PCK1P35558 622 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 MFAP3P55082 362 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 PEX3P56589 373 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 IRX1P78414 480 aaPredicted RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 PCNX4Q63HM2 1172 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 GSTA5Q7RTV2 222 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 HAUS6Q7Z4H7 955 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 ABT1Q9ULW3 272 aaKnown RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 KRT10P13645 584 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 KRT15P19012 456 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 ATP4AP20648 1035 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 CTCFP49711 727 aaPredicted RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 YARSP54577 528 aaKnown RBP15.16■□□□□ 0.02
MSH5-206ENST00000423982 CCDC15Q0P6D6 951 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 KAZNQ674X7 775 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 PASD1Q8IV76 773 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 ANKRD35Q8N283 1001 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 DENND1AQ8TEH3 1009 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 BRI3BPQ8WY22 251 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 POMGNT1Q8WZA1 660 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 TAAR1Q96RJ0 339 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 TRABDQ9H4I3 376 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 USH1CQ9Y6N9 552 aa15.16■□□□□ 0.02
MSH5-206ENST00000423982 PIK3CDO00329 1044 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 MYCLP12524 364 aaPredicted RBP15.15■□□□□ 0.02
MSH5-206ENST00000423982 TCF4P15884 667 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 PTDSS1P48651 473 aaKnown RBP15.15■□□□□ 0.02
MSH5-206ENST00000423982 OVGP1Q12889 678 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 KLF1Q13351 362 aaPredicted RBP15.15■□□□□ 0.02
MSH5-206ENST00000423982 SNRNP35Q16560 246 aaKnown RBP15.15■□□□□ 0.02
MSH5-206ENST00000423982 CLEC16AQ2KHT3 1053 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 PLEKHG4Q58EX7 1191 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 LMBRD2Q68DH5 695 aaPredicted RBP15.15■□□□□ 0.02
MSH5-206ENST00000423982 GPAT2Q6NUI2 795 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 ACCSQ96QU6 501 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 PIDD1Q9HB75 910 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 LARSQ9P2J5 1176 aaKnown RBP15.15■□□□□ 0.02
MSH5-206ENST00000423982 STARD13Q9Y3M8 1113 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 BTBD19C9JJ37 291 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 PDHXO00330 501 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 WFS1O76024 890 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 CA4P22748 312 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 SOX10P56693 466 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 STAT4Q14765 748 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 Q3C1V9 767 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 C10orf82Q8WW14 230 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 MS4A4AQ96JQ5 239 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 SYT15Q9BQS2 421 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 ALG13Q9NP73 1137 aaKnown RBP15.15■□□□□ 0.02
MSH5-206ENST00000423982 NPHS2Q9NP85 383 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 DCTN4Q9UJW0 460 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 LRRC42Q9Y546 428 aa15.15■□□□□ 0.02
MSH5-206ENST00000423982 RLFQ13129 1914 aa15.14■□□□□ 0.02
MSH5-206ENST00000423982 KIF3CO14782 793 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 MAPK13O15264 365 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 EDF1O60869 148 aaKnown RBP15.14■□□□□ 0.01
MSH5-206ENST00000423982 PSMC4P43686 418 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 PARP6Q2NL67 630 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 GNPTABQ3T906 1256 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 FAM182AQ5T1J6 154 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 FASTKD5Q7L8L6 764 aaKnown RBP15.14■□□□□ 0.01
MSH5-206ENST00000423982 MCOLN2Q8IZK6 566 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 SYTL5Q8TDW5 730 aaPredicted RBP15.14■□□□□ 0.01
MSH5-206ENST00000423982 GRAMD1AQ96CP6 724 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 HAUS1Q96CS2 278 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 MIPEPQ99797 713 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 PLVAPQ9BX97 442 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 UBN1Q9NPG3 1134 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 DNAH12Q6ZR08 3092 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 HTTP42858 3142 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 GOLGA8SH3BPF8 625 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 GOLGA8MH3BSY2 632 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 P4HA2O15460 535 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 ITGB5P18084 799 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 TRAF1Q13077 416 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 EFTUD2Q15029 972 aaKnown RBP eCLIP15.14■□□□□ 0.019e-10■■■■■ 39.2
MSH5-206ENST00000423982 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 LBX2Q6XYB7 198 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 OTOAQ7RTW8 1153 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 MTDHQ86UE4 582 aaKnown RBP15.14■□□□□ 0.01
MSH5-206ENST00000423982 AGGF1Q8N302 714 aaeCLIP15.14■□□□□ 0.016e-11■■□□□ 13.8
MSH5-206ENST00000423982 TAB3Q8N5C8 712 aaPredicted RBP15.14■□□□□ 0.01
MSH5-206ENST00000423982 GRK7Q8WTQ7 553 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 ACSF2Q96CM8 615 aaPredicted RBP15.14■□□□□ 0.01
MSH5-206ENST00000423982 RMDN3Q96TC7 470 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 TMEM206Q9H813 350 aa15.14■□□□□ 0.01
MSH5-206ENST00000423982 METTL5Q9NRN9 209 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms