RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 EPS15L1Q9UBC2 864 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 YIPF1Q9Y548 306 aa28.39■■■□□ 2.14
CDK9-202ENST00000421939 GPR37L1O60883 481 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 ZXDAP98168 799 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 TWF1Q12792 350 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 CEP135Q66GS9 1140 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 TMEM86AQ8N2M4 240 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 SPATA20Q8TB22 786 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 PARD3BQ8TEW8 1205 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 ERCC4Q92889 916 aaPredicted RBP28.38■■■□□ 2.13
CDK9-202ENST00000421939 SORCS3Q9UPU3 1222 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 FRMD4BQ9Y2L6 1034 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 PCDHA5Q9Y5H7 936 aa28.38■■■□□ 2.13
CDK9-202ENST00000421939 NR2F2P24468 414 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 DUSP4Q13115 394 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 SLC39A12Q504Y0 691 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 ZCWPW2Q504Y3 356 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 CENPPQ6IPU0 288 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 ELOA2Q8IYF1 753 aaPredicted RBP28.37■■■□□ 2.13
CDK9-202ENST00000421939 TOP6BLQ8N6T0 577 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 ATAD1Q8NBU5 361 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 SPATA18Q8TC71 538 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 ZNF516Q92618 1163 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 CRISPLD1Q9H336 500 aa28.37■■■□□ 2.13
CDK9-202ENST00000421939 LRRIQ3A6PVS8 624 aaPredicted RBP28.36■■■□□ 2.13
CDK9-202ENST00000421939 RHOP08100 348 aa28.36■■■□□ 2.13
CDK9-202ENST00000421939 CLDN10P78369 228 aa28.36■■■□□ 2.13
CDK9-202ENST00000421939 MTMR3Q13615 1198 aa28.36■■■□□ 2.13
CDK9-202ENST00000421939 ZNF658Q5TYW1 1059 aaPredicted RBP28.36■■■□□ 2.13
CDK9-202ENST00000421939 ADGRF2Q8IZF7 708 aa28.36■■■□□ 2.13
CDK9-202ENST00000421939 ELMOD1Q8N336 334 aa28.36■■■□□ 2.13
CDK9-202ENST00000421939 ZFP37Q9Y6Q3 630 aaPredicted RBP28.36■■■□□ 2.13
CDK9-202ENST00000421939 NOTCH4Q99466 2003 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 LAMP2P13473 410 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 AP3M2P53677 418 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 TSPY1Q01534 308 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 PLD1Q13393 1074 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 ITFG1Q8TB96 612 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 CORO1BQ9BR76 489 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 AVENQ9NQS1 362 aaPredicted RBP28.35■■■□□ 2.13
CDK9-202ENST00000421939 DDX43Q9NXZ2 648 aaKnown RBP28.35■■■□□ 2.13
CDK9-202ENST00000421939 CDH7Q9ULB5 785 aa28.35■■■□□ 2.13
CDK9-202ENST00000421939 TECTAO75443 2155 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 MAPK13O15264 365 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 CST3P01034 146 aaPredicted RBP28.34■■■□□ 2.13
CDK9-202ENST00000421939 PTPN2P17706 415 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 RPL13P26373 211 aaKnown RBP28.34■■■□□ 2.13
CDK9-202ENST00000421939 MYL7Q01449 175 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 SMARCB1Q12824 385 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 BIRC3Q13489 604 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 TRPC3Q13507 836 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 SOWAHAQ2M3V2 549 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 COBLL1Q53SF7 1204 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 IQCEQ6IPM2 695 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 LIMS2Q7Z4I7 341 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 DCP1BQ8IZD4 617 aaKnown RBP28.34■■■□□ 2.13
CDK9-202ENST00000421939 TTC9BQ8N6N2 239 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 TMC2Q8TDI7 906 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 FGF13Q92913 245 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 LRFN3Q9BTN0 628 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 GTPBP4Q9BZE4 634 aaKnown RBP28.34■■■□□ 2.13
CDK9-202ENST00000421939 KCNK12Q9HB15 430 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 CEP72Q9P209 647 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 IGSF9Q9P2J2 1179 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 HSFX1Q9UBD0 423 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 MRPS23Q9Y3D9 190 aaKnown RBP28.34■■■□□ 2.13
CDK9-202ENST00000421939 MYO10Q9HD67 2058 aa28.34■■■□□ 2.13
CDK9-202ENST00000421939 PHACTR2O75167 634 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 AKAP3O75969 853 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 PRCPP42785 496 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 UBE2HP62256 183 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 SLC5A9Q2M3M2 681 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 EDRF1Q3B7T1 1238 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 TDRD10Q5VZ19 366 aaKnown RBP28.33■■■□□ 2.13
CDK9-202ENST00000421939 TRIM67Q6ZTA4 783 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 DPH6Q7L8W6 267 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 LRRTM3Q86VH5 581 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 OSTM1Q86WC4 334 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 UBALD2Q8IYN6 164 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 C2orf15Q8WU43 125 aaKnown RBP28.33■■■□□ 2.13
CDK9-202ENST00000421939 ZNF512Q96ME7 567 aaPredicted RBP28.33■■■□□ 2.13
CDK9-202ENST00000421939 SLC27A5Q9Y2P5 690 aa28.33■■■□□ 2.13
CDK9-202ENST00000421939 PRR33A8MZF0 331 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 GABRDO14764 452 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 PCSK1P29120 753 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 ALDH1A3P47895 512 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 LHX1P48742 406 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 DLG4P78352 724 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 SIGLEC14Q08ET2 396 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 NPAS3Q8IXF0 933 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 FAM186BQ8IYM0 893 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 SPPL2BQ8TCT7 592 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 ACBD6Q9BR61 282 aa28.32■■■□□ 2.12
CDK9-202ENST00000421939 STAU1O95793 577 aaKnown RBP28.31■■■□□ 2.12
CDK9-202ENST00000421939 ACAT1P24752 427 aaKnown RBP28.31■■■□□ 2.12
CDK9-202ENST00000421939 ATICP31939 592 aa28.31■■■□□ 2.12
CDK9-202ENST00000421939 EPHB3P54753 998 aa28.31■■■□□ 2.12
CDK9-202ENST00000421939 MYL6P60660 151 aa28.31■■■□□ 2.12
CDK9-202ENST00000421939 ADAM9Q13443 819 aa28.31■■■□□ 2.12
CDK9-202ENST00000421939 INTS6LQ5JSJ4 861 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms