RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ZGPATQ8N5A5 531 aaKnown RBP5.97□□□□□ -1.45
SFXN1-202ENST00000421887 PROKR1Q8TCW9 393 aa5.97□□□□□ -1.45
SFXN1-202ENST00000421887 ZFYVE21Q9BQ24 234 aa5.97□□□□□ -1.45
SFXN1-202ENST00000421887 ALG1Q9BT22 464 aa5.97□□□□□ -1.45
SFXN1-202ENST00000421887 GNL3LQ9NVN8 582 aaKnown RBP5.97□□□□□ -1.45
SFXN1-202ENST00000421887 UCKL1Q9NWZ5 548 aa5.97□□□□□ -1.45
SFXN1-202ENST00000421887 FLRT1Q9NZU1 646 aa5.97□□□□□ -1.45
SFXN1-202ENST00000421887 SRPK3Q9UPE1 567 aa5.97□□□□□ -1.45
SFXN1-202ENST00000421887 ATP23Q9Y6H3 246 aa5.97□□□□□ -1.45
SFXN1-202ENST00000421887 SMCHD1A6NHR9 2005 aa5.96□□□□□ -1.45
SFXN1-202ENST00000421887 ATRNL1Q5VV63 1379 aa5.96□□□□□ -1.45
SFXN1-202ENST00000421887 PDE8BO95263 885 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 TIMP1P01033 207 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 ASNSP08243 561 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 RARBP10826 455 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 CDK4P11802 303 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 CYBAP13498 195 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 SLC5A1P13866 664 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 AOAHP28039 575 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 PRDX5P30044 214 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 BACE1P56817 501 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 ATP2C1P98194 919 aaPredicted RBP5.96□□□□□ -1.46
SFXN1-202ENST00000421887 LRRC41Q15345 812 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 PUM3Q15397 648 aaKnown RBP5.96□□□□□ -1.46
SFXN1-202ENST00000421887 ELAVL1Q15717 326 aaKnown RBP5.96□□□□□ -1.46
SFXN1-202ENST00000421887 FXNQ16595 210 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 SLC10A6Q3KNW5 377 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 LY6G5CQ5SRR4 150 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 GRAMD4Q6IC98 578 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 MFSD5Q6N075 450 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
SFXN1-202ENST00000421887 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.96□□□□□ -1.46
SFXN1-202ENST00000421887 NUP133Q8WUM0 1156 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 RABGGTAQ92696 567 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 PUS3Q9BZE2 481 aaKnown RBP5.96□□□□□ -1.46
SFXN1-202ENST00000421887 XPNPEP3Q9NQH7 507 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 MROH7Q68CQ1 1323 aa5.96□□□□□ -1.46
SFXN1-202ENST00000421887 BLACEA4D250 179 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 GRM8O00222 908 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 HOXC6P09630 235 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 ZNF853P0CG23 659 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 ADAM15Q13444 863 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 NTRK3Q16288 839 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 TNNI3KQ59H18 835 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 COLEC12Q5KU26 742 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 TMEM240Q5SV17 173 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 KANK2Q63ZY3 851 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 ZNF365Q70YC5 407 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 G2E3Q7L622 706 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 NT5DC4Q86YG4 428 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 TSPYL6Q8N831 410 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 PGBD4Q96DM1 585 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 CDK5RAP2Q96SN8 1893 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 AMNQ9BXJ7 453 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 STARD7Q9NQZ5 370 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 RABGAP1Q9Y3P9 1069 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 PRRC2BQ5JSZ5 2229 aaKnown RBP5.95□□□□□ -1.46
SFXN1-202ENST00000421887 ZNF521Q96K83 1311 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 KIF16BQ96L93 1317 aa5.95□□□□□ -1.46
SFXN1-202ENST00000421887 CACNA1AO00555 2505 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 ZNFX1Q9P2E3 1918 aaKnown RBP5.94□□□□□ -1.46
SFXN1-202ENST00000421887 A0A0A6YYK5 440 aaPredicted RBP5.94□□□□□ -1.46
SFXN1-202ENST00000421887 PRODHO43272 600 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 STRNO43815 780 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 ABHD16AO95870 558 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 FGBP02675 491 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 CSF2RAP15509 400 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 ITGB6P18564 788 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 KRT15P19012 456 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 BTDP43251 543 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 GRB14Q14449 540 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 TWISTNBQ3B726 338 aaPredicted RBP5.94□□□□□ -1.46
SFXN1-202ENST00000421887 RABL3Q5HYI8 236 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 FAM47AQ5JRC9 791 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 OLFML1Q6UWY5 402 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 ANKRD33Q7Z3H0 272 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 PTRH1Q86Y79 214 aaKnown RBP5.94□□□□□ -1.46
SFXN1-202ENST00000421887 TRPV1Q8NER1 839 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 UBXN4Q92575 508 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 LENG9Q96B70 501 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 RPL10LQ96L21 214 aaKnown RBP5.94□□□□□ -1.46
SFXN1-202ENST00000421887 FEZ1Q99689 392 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 EPN3Q9H201 632 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 OR10A5Q9H207 317 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 CATSPERZQ9NTU4 200 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 BTBD7Q9P203 1132 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 ABCF2Q9UG63 623 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 HERC5Q9UII4 1024 aaKnown RBP5.94□□□□□ -1.46
SFXN1-202ENST00000421887 DENND2AQ9ULE3 1009 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 A0A0G2JMZ2 1700 aa5.94□□□□□ -1.46
SFXN1-202ENST00000421887 MAN2B1O00754 1011 aa5.93□□□□□ -1.46
SFXN1-202ENST00000421887 PGK1P00558 417 aa5.93□□□□□ -1.46
SFXN1-202ENST00000421887 ADORA2AP29274 412 aa5.93□□□□□ -1.46
SFXN1-202ENST00000421887 HSP90AA2PQ14568 343 aaPredicted RBP5.93□□□□□ -1.46
SFXN1-202ENST00000421887 GPR19Q15760 415 aa5.93□□□□□ -1.46
SFXN1-202ENST00000421887 LRRC24Q50LG9 513 aa5.93□□□□□ -1.46
SFXN1-202ENST00000421887 PAPD7Q5XG87 772 aaKnown RBP5.93□□□□□ -1.46
SFXN1-202ENST00000421887 KCNV1Q6PIU1 500 aa5.93□□□□□ -1.46
SFXN1-202ENST00000421887 FAM177A1Q8N128 213 aaPredicted RBP5.93□□□□□ -1.46
SFXN1-202ENST00000421887 LPIN2Q92539 896 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms