RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 LIMS2Q7Z4I7 341 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 LRRTM3Q86VH5 581 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 SLC9A9Q8IVB4 645 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 FBXL6Q8N531 539 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 FAM84AQ96KN4 292 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 PGLYRP2Q96PD5 576 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 CORO1BQ9BR76 489 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 GZF1Q9H116 711 aaPredicted RBP15.97■□□□□ 0.15
LINC01840-201ENST00000421870 KCNH6Q9H252 994 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 GDE1Q9NZC3 331 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 MRPS23Q9Y3D9 190 aaKnown RBP15.97■□□□□ 0.15
LINC01840-201ENST00000421870 HCN4Q9Y3Q4 1203 aa15.97■□□□□ 0.15
LINC01840-201ENST00000421870 TULP1O00294 542 aaPredicted RBP15.96■□□□□ 0.15
LINC01840-201ENST00000421870 ZNF197O14709 1029 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 PRPF40AO75400 957 aaKnown RBP15.96■□□□□ 0.15
LINC01840-201ENST00000421870 CST3P01034 146 aaPredicted RBP15.96■□□□□ 0.15
LINC01840-201ENST00000421870 TNNC2P02585 160 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 KRT19P08727 400 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 CYP2J2P51589 502 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 CLDN10P78369 228 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 KCNB1Q14721 858 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 LMBRD2Q68DH5 695 aaPredicted RBP15.96■□□□□ 0.15
LINC01840-201ENST00000421870 IQCEQ6IPM2 695 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 PARM1Q6UWI2 310 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 TRAPPC11Q7Z392 1133 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 NPAS3Q8IXF0 933 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 FMR1NBQ8N0W7 255 aaPredicted RBP15.96■□□□□ 0.15
LINC01840-201ENST00000421870 TMEM86AQ8N2M4 240 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 ATAD1Q8NBU5 361 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 ENGASEQ8NFI3 743 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 SPATA18Q8TC71 538 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 C2orf15Q8WU43 125 aaKnown RBP15.96■□□□□ 0.15
LINC01840-201ENST00000421870 ZNF516Q92618 1163 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 FGF14Q92915 247 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 RPP25Q9BUL9 199 aaKnown RBP15.96■□□□□ 0.15
LINC01840-201ENST00000421870 LRRC3Q9BY71 257 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 WNT16Q9UBV4 365 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 L1RE1Q9UN81 338 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 SLC27A5Q9Y2P5 690 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 NUMBLQ9Y6R0 609 aa15.96■□□□□ 0.15
LINC01840-201ENST00000421870 KMT2EQ8IZD2 1858 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 WDFY4Q6ZS81 3184 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 GABRDO14764 452 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 NARSO43776 548 aaKnown RBP15.95■□□□□ 0.14
LINC01840-201ENST00000421870 HUS1O60921 280 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 MOSPD3O75425 235 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 SRFP11831 508 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 CCR2P41597 374 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 ALDH1A3P47895 512 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 TUFMP49411 452 aaKnown RBP15.95■□□□□ 0.14
LINC01840-201ENST00000421870 PLD1Q13393 1074 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 SNW1Q13573 536 aaKnown RBP15.95■□□□□ 0.14
LINC01840-201ENST00000421870 SLC39A12Q504Y0 691 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 CYP4A22Q5TCH4 519 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 MTSS1LQ765P7 747 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 HS6ST3Q8IZP7 471 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 ELMOD1Q8N336 334 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 PDCL2Q8N4E4 241 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 TOP6BLQ8N6T0 577 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 LEMD2Q8NC56 503 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 HPDLQ96IR7 371 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 FNBP1Q96RU3 617 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 ACBD6Q9BR61 282 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 DNAJC25Q9H1X3 360 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 TRAF3IP3Q9Y228 551 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 YIPF1Q9Y548 306 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 ASB3Q9Y575 518 aa15.95■□□□□ 0.14
LINC01840-201ENST00000421870 EXOC3O60645 756 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 PDGFBP01127 241 aaPredicted RBP15.94■□□□□ 0.14
LINC01840-201ENST00000421870 FAM163BP0C2L3 166 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 TNNI1P19237 187 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 AVPR2P30518 371 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 EPHB3P54753 998 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 BFSP1Q12934 665 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 MYO1EQ12965 1108 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 SOWAHAQ2M3V2 549 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 PDZD4Q76G19 769 aaPredicted RBP15.94■□□□□ 0.14
LINC01840-201ENST00000421870 SUGP1Q8IWZ8 645 aaKnown RBP15.94■□□□□ 0.14
LINC01840-201ENST00000421870 TTC9BQ8N6N2 239 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 SPPL2BQ8TCT7 592 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 PARD3BQ8TEW8 1205 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 CCDC47Q96A33 483 aaKnown RBP15.94■□□□□ 0.14
LINC01840-201ENST00000421870 CCDC127Q96BQ5 260 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 TCEAL4Q96EI5 215 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 MCRS1Q96EZ8 462 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 CGRRF1Q99675 332 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 SLC2A4RGQ9NR83 387 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 R3HCC1Q9Y3T6 440 aaKnown RBP15.94■□□□□ 0.14
LINC01840-201ENST00000421870 SNX9Q9Y5X1 595 aa15.94■□□□□ 0.14
LINC01840-201ENST00000421870 NRG2O14511 850 aaPredicted RBP15.93■□□□□ 0.14
LINC01840-201ENST00000421870 KIF20AO95235 890 aa15.93■□□□□ 0.14
LINC01840-201ENST00000421870 DLATP10515 647 aaKnown RBP15.93■□□□□ 0.14
LINC01840-201ENST00000421870 CEBPBP17676 345 aa15.93■□□□□ 0.14
LINC01840-201ENST00000421870 LHX1P48742 406 aa15.93■□□□□ 0.14
LINC01840-201ENST00000421870 NFIL3Q16649 462 aa15.93■□□□□ 0.14
LINC01840-201ENST00000421870 DNAJB7Q7Z6W7 309 aaPredicted RBP15.93■□□□□ 0.14
LINC01840-201ENST00000421870 TMC8Q8IU68 726 aa15.93■□□□□ 0.14
LINC01840-201ENST00000421870 DCP1BQ8IZD4 617 aaKnown RBP15.93■□□□□ 0.14
LINC01840-201ENST00000421870 GUF1Q8N442 669 aaKnown RBP15.93■□□□□ 0.14
LINC01840-201ENST00000421870 PLEKHO2Q8TD55 490 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms