RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 AKT1P31749 480 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 MMS22LQ6ZRQ5 1243 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 PID1Q7Z2X4 250 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 KCPQ6ZWJ8 1503 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 FOXN1O15353 648 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 ADCY6O43306 1168 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 MTSS1O43312 755 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 KDM1AO60341 852 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 FBXO21O94952 628 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 FSTL1Q12841 308 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 TTC19Q6DKK2 380 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 FIBCD1Q8N539 461 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 CYP3A43Q9HB55 503 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 SLC13A4Q9UKG4 626 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 NFASCO94856 1347 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.6
PTCH1-206ENST00000421141 EXT2Q93063 718 aa11.27□□□□□ -0.6
PTCH1-206ENST00000421141 HIPK3Q9H422 1215 aa11.27□□□□□ -0.6
PTCH1-206ENST00000421141 SUDS3Q9H7L9 328 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-206ENST00000421141 CINPQ9BW66 212 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-206ENST00000421141 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.6
PTCH1-206ENST00000421141 CCDC151A5D8V7 595 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 FAM86B1E9PN63 330 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 HGSO14964 777 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 FAM86B2P0C5J1 330 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 AKAP5P24588 427 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 PPM1AP35813 382 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 CASP2P42575 452 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 GIT2Q14161 759 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 CCDC149Q6ZUS6 474 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 ZNF558Q96NG5 402 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 CGRRF1Q99675 332 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 TTC26A0AVF1 554 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 CTCFP49711 727 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 ACOT1Q86TX2 421 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 ZC3H18Q86VM9 953 aaKnown RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 STN1Q9H668 368 aaKnown RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 STK39Q9UEW8 545 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 SF3B1O75533 1304 aaKnown RBP eCLIP11.27□□□□□ -0.614e-7■■■■■ 133.7
PTCH1-206ENST00000421141 PDK1Q15118 436 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 IMPG1Q17R60 797 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 THEMIS2Q5TEJ8 643 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 SNX19Q92543 992 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 UROC1Q96N76 676 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 PCDHB5Q9Y5E4 795 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 F5H423 210 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 BRD2P25440 801 aaKnown RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 TUFMP49411 452 aaKnown RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-206ENST00000421141 ZNF720Q7Z2F6 126 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 CNPY4Q8N129 248 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 MYRIPQ8NFW9 859 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 TBK1Q9UHD2 729 aa11.27□□□□□ -0.61
PTCH1-206ENST00000421141 GOLGA8MH3BSY2 632 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 KRT38O76015 456 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 GRB10Q13322 594 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 SEZ6Q53EL9 994 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 MDH1BQ5I0G3 518 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 SAYSD1Q9NPB0 183 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 EVPLQ92817 2033 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ETFBP38117 255 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 PPARDQ03181 441 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 TATDN1Q6P1N9 297 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 UNC45BQ8IWX7 931 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 BHMTQ93088 406 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ELNP15502 786 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 EIF3BP55884 814 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 GLE1Q53GS7 698 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 VSIG10LQ86VR7 867 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 CDC26Q8NHZ8 85 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 SMARCD1Q96GM5 515 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 EGFL8Q99944 293 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 DDIT4Q9NX09 232 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ESRRBO95718 433 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ASS1P00966 412 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 CYP3A4P08684 503 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ACO1P21399 889 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 PPIGQ13427 754 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 TBCCQ15814 346 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 SLC18A3Q16572 532 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 PPFIBP2Q8ND30 876 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 TMEM51Q9NW97 253 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 RWDD3Q9Y3V2 267 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 POLR2AP24928 1970 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ACKR2O00590 384 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms