RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 HAUS2Q9NVX0 235 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 HOXC10Q9NYD6 342 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 CPSF3Q9UKF6 684 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 PATJQ8NI35 1801 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 MYLKQ15746 1914 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 IGKV6-21A0A0C4DH24 114 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 VGLL3A8MV65 326 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 OGTO15294 1046 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 MGRN1O60291 552 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 LGR5O75473 907 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 TOM1L1O75674 476 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 VIMP08670 466 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 HOXC6P09630 235 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 BRAFP15056 766 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 CETN2P41208 172 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 MAGEA4P43358 317 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 IFNAR2P48551 515 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 SLC18A1P54219 525 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 VCPP55072 806 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 RASA2Q15283 850 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 SURF1Q15526 300 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 TAZQ16635 292 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 P3H1Q32P28 736 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 GALNTL6Q49A17 601 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 FAM160B1Q5W0V3 765 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 LBX2Q6XYB7 198 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 POLNQ7Z5Q5 900 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 RIOX2Q8IUF8 465 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 GLIS1Q8NBF1 620 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 FAM167AQ96KS9 214 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 MAGEB18Q96M61 343 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 TTC25Q96NG3 672 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 ACO2Q99798 780 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 ELAC2Q9BQ52 826 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 MRPL4Q9BYD3 311 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 IMPG2Q9BZV3 1241 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 DDX56Q9NY93 547 aaKnown RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 PRKAG3Q9UGI9 489 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 DNPEPQ9ULA0 475 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 SHOC2Q9UQ13 582 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 USTQ9Y2C2 406 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 EFR3BQ9Y2G0 817 aa9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 USP15Q9Y4E8 981 aaPredicted RBP9.23□□□□□ -0.93
TRIM49D1-201ENST00000420869 PTPRDP23468 1912 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 DOCK3Q8IZD9 2030 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 SOWAHBA6NEL2 793 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 C3orf70A6NLC5 250 aaPredicted RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 ZBTB42B2RXF5 422 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 NDC80O14777 642 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 CHUKO15111 745 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 TJP3O95049 919 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 CST3P01034 146 aaPredicted RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 KRT1P04264 644 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 ITGAVP06756 1048 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 EIF4BP23588 611 aaKnown RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 SSTR3P32745 418 aaPredicted RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 CDKN2BP42772 138 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 ASPAP45381 313 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 VPS41P49754 854 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 MYL6P60660 151 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 SLC25A11Q02978 314 aaKnown RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 NR1H3Q13133 447 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 ACVR2BQ13705 512 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 PIGHQ14442 188 aaPredicted RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 MORF4L2Q15014 288 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 ATP13A4Q4VNC1 1196 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 RNASEH2BQ5TBB1 312 aaKnown RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 ANGEL2Q5VTE6 544 aaKnown RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 IER5Q5VY09 327 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 CGB2Q6NT52 195 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 DNAJC24Q6P3W2 148 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 TRABD2AQ86V40 505 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 WDTC1Q8N5D0 677 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 TMEM35BQ8NCS4 154 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 SLC35B2Q8TB61 432 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 C9orf72Q96LT7 481 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 MCEEQ96PE7 176 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 RBM15Q96T37 977 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 FAM118BQ9BPY3 351 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 FHDC1Q9C0D6 1143 aaPredicted RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 MTMR12Q9C0I1 747 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 XYLT2Q9H1B5 865 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 PPCSQ9HAB8 311 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 PCDH9Q9HC56 1237 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 UBN1Q9NPG3 1134 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 CISHQ9NSE2 258 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 NRBP2Q9NSY0 501 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 ABCF3Q9NUQ8 709 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 FGFR1OP2Q9NVK5 253 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 DNAJC17Q9NVM6 304 aaKnown RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 KLHL11Q9NVR0 708 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 RGS17Q9UGC6 210 aaPredicted RBP9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 FZD1Q9UP38 647 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 NAALADL1Q9UQQ1 740 aa9.22□□□□□ -0.93
TRIM49D1-201ENST00000420869 MIA3Q5JRA6 1907 aa9.21□□□□□ -0.93
TRIM49D1-201ENST00000420869 CFAP73A6NFT4 308 aa9.21□□□□□ -0.93
TRIM49D1-201ENST00000420869 TCP11X1B4DZS4 312 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms