RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 ARL2P36404 184 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 ALDH1A3P47895 512 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 CSRP3P50461 194 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 PPP2R5CQ13362 524 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 RTN1Q16799 776 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 MAP7D1Q3KQU3 841 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 HSF5Q4G112 596 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-206ENST00000420746 APOA5Q6Q788 366 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 RNF19BQ6ZMZ0 732 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 ITIH5Q86UX2 942 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 GPIHBP1Q8IV16 184 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 CPA6Q8N4T0 437 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 APPL2Q8NEU8 664 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 BAHD1Q8TBE0 780 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-206ENST00000420746 ASAP3Q8TDY4 903 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 GJA10Q969M2 543 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 ADPGKQ9BRR6 497 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 ZDHHC5Q9C0B5 715 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 LNPKQ9C0E8 428 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 CXCL16Q9H2A7 254 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 PDZD7Q9H5P4 517 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 BMP2KQ9NSY1 1161 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-206ENST00000420746 TOR4AQ9NXH8 423 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 WRAP73Q9P2S5 460 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-206ENST00000420746 PTPRQQ9UMZ3 2332 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 PI4KAP42356 2102 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 KIAA1549LQ6ZVL6 1849 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 ZNF883P0CG24 379 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 GLRA2P23416 452 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 PSMD2Q13200 908 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 HDAC1Q13547 482 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-206ENST00000420746 SMAD1Q15797 465 aaKnown RBP9.89□□□□□ -0.83
TRIM39-206ENST00000420746 TRIM68Q6AZZ1 485 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 CC2D1AQ6P1N0 951 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-206ENST00000420746 MOXD1Q6UVY6 613 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 SLC36A4Q6YBV0 504 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 DNAJB7Q7Z6W7 309 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-206ENST00000420746 CMTM8Q8IZV2 173 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 OR2I1PQ8NGU4 316 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 RUFY2Q8WXA3 655 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 RLN3Q8WXF3 142 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 NXPE2Q96DL1 559 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 SUSD3Q96L08 255 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 CDC6Q99741 560 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 C22orf23Q9BZE7 217 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 FZD8Q9H461 694 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 FAM124BQ9H5Z6 455 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-206ENST00000420746 SLC38A7Q9NVC3 462 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 HSFX1Q9UBD0 423 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 PLXND1Q9Y4D7 1925 aa9.89□□□□□ -0.83
TRIM39-206ENST00000420746 ATG2BQ96BY7 2078 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 EML1O00423 815 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 PODXLO00592 558 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 DGAT1O75907 488 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 VNN2O95498 520 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 C6P13671 934 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 HLA-EP13747 358 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 ARSAP15289 507 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 DDX6P26196 483 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRIM39-206ENST00000420746 RPL9P32969 192 aaKnown RBP9.88□□□□□ -0.83
TRIM39-206ENST00000420746 RCAN1P53805 252 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 MRPS21P82921 87 aaKnown RBP9.88□□□□□ -0.83
TRIM39-206ENST00000420746 RHDQ02161 417 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 ZNF33AQ06730 810 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 ZNF268Q14587 947 aaPredicted RBP9.88□□□□□ -0.83
TRIM39-206ENST00000420746 DCAF4L1Q3SXM0 396 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 XKR9Q5GH70 373 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 GLRA4Q5JXX5 417 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 CDCA2Q69YH5 1023 aaPredicted RBP9.88□□□□□ -0.83
TRIM39-206ENST00000420746 SNIP1Q8TAD8 396 aaKnown RBP9.88□□□□□ -0.83
TRIM39-206ENST00000420746 BAP1Q92560 729 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 GCNAQ96QF7 691 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 LXNQ9BS40 222 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 SLC46A2Q9BY10 475 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 ECT2Q9H8V3 914 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 GOLGA2P5Q9HBQ8 144 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 SUSD2Q9UGT4 822 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 VAV3Q9UKW4 847 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 ARID2Q68CP9 1835 aa9.88□□□□□ -0.83
TRIM39-206ENST00000420746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-206ENST00000420746 SMIM28A0A1B0GU29 152 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 ZBTB43O43298 467 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 OAZ2O95190 189 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 U2AF2P26368 475 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRIM39-206ENST00000420746 AVPR1AP37288 418 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 IL12RB1P42701 662 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 RPL6Q02878 288 aaKnown RBP9.87□□□□□ -0.83
TRIM39-206ENST00000420746 SOX4Q06945 474 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-206ENST00000420746 BFSP1Q12934 665 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 DUSP4Q13115 394 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 GPR17Q13304 367 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 TAF1BQ53T94 588 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-206ENST00000420746 XKR4Q5GH76 650 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 NAIF1Q69YI7 327 aaPredicted RBP9.87□□□□□ -0.83
TRIM39-206ENST00000420746 TMEM92Q6UXU6 159 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 NOSTRINQ8IVI9 506 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 CCDC148Q8NFR7 591 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 DDX12PQ92771 950 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 ATP2A3Q93084 1043 aa9.87□□□□□ -0.83
TRIM39-206ENST00000420746 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms