RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 CNTN6Q9UQ52 1028 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 NFS1Q9Y697 457 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 FOXO6A8MYZ6 492 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.92
SNCA-206ENST00000420646 TSPAN1O60635 241 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 PROSCO94903 275 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 ATF7P17544 494 aaPredicted RBP9.34□□□□□ -0.92
SNCA-206ENST00000420646 AKAP5P24588 427 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 RFC1P35251 1148 aaPredicted RBP9.34□□□□□ -0.92
SNCA-206ENST00000420646 ZNF844Q08AG5 666 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 PPP1R7Q15435 360 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 ZSCAN26Q16670 478 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 PTPN20Q4JDL3 420 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 OLFML2BQ68BL8 750 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 PLEKHA7Q6IQ23 1121 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.92
SNCA-206ENST00000420646 PLEKHH3Q7Z736 793 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 ZNF677Q86XU0 584 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.92
SNCA-206ENST00000420646 C2orf69Q8N8R5 385 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 JOSD2Q8TAC2 188 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 RUBCNQ92622 972 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 CCDC114Q96M63 670 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 ZMAT2Q96NC0 199 aaKnown RBP9.34□□□□□ -0.92
SNCA-206ENST00000420646 ELOVL4Q9GZR5 314 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 VTA1Q9NP79 307 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 SNTG2Q9NY99 539 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 KLK14Q9P0G3 267 aa9.34□□□□□ -0.92
SNCA-206ENST00000420646 TLDC2A0PJX2 215 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 GAS2O43903 313 aaKnown RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 B4GALT4O60513 344 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 GRAP2O75791 330 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 ERLIN2O94905 339 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 IBSPP21815 317 aaPredicted RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 SLCO1A2P46721 670 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 TNFAIP2Q03169 654 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 MTM1Q13496 603 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 GRB14Q14449 540 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 DUSP28Q4G0W2 176 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 ZNF667Q5HYK9 610 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 ZNF484Q5JVG2 852 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 LIN9Q5TKA1 542 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 LRRC31Q6UY01 552 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 GLIS1Q8NBF1 620 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 FEZF2Q8TBJ5 459 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 SEC14L1Q92503 715 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 C18orf25Q96B23 403 aaPredicted RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 CPXM1Q96SM3 734 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 PRMT7Q9NVM4 692 aaPredicted RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 GJD2Q9UKL4 321 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 TULP2O00295 520 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 TP73O15350 636 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 STRNO43815 780 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 OPA1O60313 960 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 ETS1P14921 441 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 IGFBP6P24592 240 aaPredicted RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 CHRNA3P32297 505 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 RAD23BP54727 409 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 DYNLT1P63172 113 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 KRT17Q04695 432 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 TAF5Q15542 800 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNCA-206ENST00000420646 ERICH1Q86X53 443 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 PHF13Q86YI8 300 aaPredicted RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 LINC01465Q8N7H1 131 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 CXorf38Q8TB03 319 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 TMEM40Q8WWA1 233 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 KCNN1Q92952 543 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 HPDLQ96IR7 371 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 PIWIL1Q96J94 861 aaKnown RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 JPH2Q9BR39 696 aaPredicted RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 EPB41L4BQ9H329 900 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 AVENQ9NQS1 362 aaPredicted RBP9.33□□□□□ -0.92
SNCA-206ENST00000420646 PARVAQ9NVD7 372 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 CACNG4Q9UBN1 327 aa9.33□□□□□ -0.92
SNCA-206ENST00000420646 TMEM191CA6NGB0 347 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 NPTXRO95502 500 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 MYCNP04198 464 aaPredicted RBP9.32□□□□□ -0.92
SNCA-206ENST00000420646 ZSCAN5DPP0CG00 497 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 HOXA11P31270 313 aaPredicted RBP9.32□□□□□ -0.92
SNCA-206ENST00000420646 SF3A3Q12874 501 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNCA-206ENST00000420646 SLC29A2Q14542 456 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 HP1BP3Q5SSJ5 553 aaPredicted RBP9.32□□□□□ -0.92
SNCA-206ENST00000420646 DNAJC24Q6P3W2 148 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 MFSD7Q6UXD7 560 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 MREGQ8N565 214 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 SLC4A11Q8NBS3 891 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 DNAJB3Q8WWF6 145 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 KIF12Q96FN5 646 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 RAB17Q9H0T7 212 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 ABHD16BQ9H3Z7 469 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 ZWILCHQ9H900 591 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 ASIC3Q9UHC3 531 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 PCSK1NQ9UHG2 260 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 MTUS1Q9ULD2 1270 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 KIF3CO14782 793 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 FSCN2O14926 492 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms