RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 KRT17Q04695 432 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 GRM2Q14416 872 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 KNOP1Q1ED39 458 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 TBC1D9BQ66K14 1250 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 PPP1R18Q6NYC8 613 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 RFX8Q6ZV50 586 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SYDE1Q6ZW31 735 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 ACAD11Q709F0 780 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 PHLDB2Q86SQ0 1253 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SLC9A9Q8IVB4 645 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CCDC105Q8IYK2 499 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 NME8Q8N427 588 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 MARCH10Q8NA82 808 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 ZNF398Q8TD17 642 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 HAS1Q92839 578 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CD101Q93033 1021 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 STMN2Q93045 179 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 ABTB1Q969K4 478 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 SLC35C1Q96A29 364 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CLMNQ96JQ2 1002 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 POLR3CQ9BUI4 534 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 C2orf49Q9BVC5 232 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 PRKD2Q9BZL6 878 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 QTRT2Q9H974 415 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 SCHIP1Q9P0W5 487 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 ANGPTL2Q9UKU9 493 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 ALG6Q9Y672 507 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 RASA4BC9J798 803 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 VILLO15195 856 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 GYG2O15488 501 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 PRPF4O43172 522 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD2-202ENST00000420239 RASA4O43374 803 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 THAP12O43422 761 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SUPT3HO75486 399 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 NTSR2O95665 410 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 LDHBP07195 334 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 XRCC5P13010 732 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 ITIH2P19823 946 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 ERFP50548 548 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SLC12A3P55017 1021 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 PHEXP78562 749 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CAV1Q03135 178 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CALCOCO2Q13137 446 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 MSLNQ13421 630 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 HNRNPDQ14103 355 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 MAP7Q14244 749 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SPARCL1Q14515 664 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 RASA3Q14644 834 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 KIF22Q14807 665 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 R3HDM1Q15032 1099 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD2-202ENST00000420239 CAVIN4Q5BKX8 364 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 ARSHQ5FYA8 562 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 HERC4Q5GLZ8 1057 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 RAPH1Q70E73 1250 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 TRABD2AQ86V40 505 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SLC13A5Q86YT5 568 aaPredicted RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 UBL4BQ8N7F7 174 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SMYD1Q8NB12 490 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 PPP2R3CQ969Q6 453 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 ZNF653Q96CK0 615 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CATSPER2Q96P56 530 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 FNBP1Q96RU3 617 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SETDB2Q96T68 719 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 NAP1L4Q99733 375 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 GPR88Q9GZN0 384 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 IQCGQ9H095 443 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 WNT8AQ9H1J5 351 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CPVLQ9H3G5 476 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 EPB41L1Q9H4G0 881 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 RAB6BQ9NRW1 208 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 TYW1Q9NV66 732 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 TMEM260Q9NX78 707 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 CLIC5Q9NZA1 410 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 LRFN2Q9ULH4 789 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 PPM1HQ9ULR3 514 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 NIP7Q9Y221 180 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD2-202ENST00000420239 WDR37Q9Y2I8 494 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.44□□□□□ -1.38
CHD2-202ENST00000420239 USP3Q9Y6I4 520 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 TLL2Q9Y6L7 1015 aa6.44□□□□□ -1.38
CHD2-202ENST00000420239 SNED1Q8TER0 1413 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 CFAP69A5D8W1 941 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 BOLA2-SMG1P6H3BVE0 249 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 SCAMP3O14828 347 aaKnown RBP6.43□□□□□ -1.38
CHD2-202ENST00000420239 ZBTB39O15060 712 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 LILRA1O75019 489 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 CDH16O75309 829 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 AKAP3O75969 853 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 ZWINTO95229 277 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 HNRNPCP07910 306 aaKnown RBP eCLIP6.43□□□□□ -1.383e-8■■■□□ 16.1
CHD2-202ENST00000420239 ABHD2P08910 425 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 CDK4P11802 303 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 RPA3P35244 121 aaPredicted RBP6.43□□□□□ -1.38
CHD2-202ENST00000420239 VPS41P49754 854 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 CASP5P51878 434 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 RAP1GDS1P52306 607 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 ITGA8P53708 1063 aa6.43□□□□□ -1.38
CHD2-202ENST00000420239 SH3BGRP55822 239 aaPredicted RBP6.43□□□□□ -1.38
CHD2-202ENST00000420239 GPSM2P81274 684 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms