RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 NXF1Q9UBU9 619 aaKnown RBP22.14■■□□□ 1.13
HMGXB4-203ENST00000420166 DPP7Q9UHL4 492 aa22.14■■□□□ 1.13
HMGXB4-203ENST00000420166 CD207Q9UJ71 328 aa22.14■■□□□ 1.13
HMGXB4-203ENST00000420166 FBXW11Q9UKB1 542 aa22.14■■□□□ 1.13
HMGXB4-203ENST00000420166 WDR27A2RRH5 827 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 CLSTN1O94985 981 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 CPB1P15086 417 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 CLUL1Q15846 466 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 THEM5Q8N1Q8 247 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 KREMEN2Q8NCW0 462 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 FBXL13Q8NEE6 735 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 OR10T2Q8NGX3 314 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 ZNF461Q8TAF7 563 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 HDAC7Q8WUI4 952 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 ELMO3Q96BJ8 720 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 IMPG2Q9BZV3 1241 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 POLIQ9UNA4 740 aa22.13■■□□□ 1.13
HMGXB4-203ENST00000420166 ABLIM3O94929 683 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 LETM1O95202 739 aaPredicted RBP22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 OR4Q2P0C623 313 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 FMO5P49326 533 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 AAK1Q2M2I8 961 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 TPGS2Q68CL5 300 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 OSTM1Q86WC4 334 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 SMRP1Q8NCR6 262 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 ENOX1Q8TC92 643 aaKnown RBP22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 KBTBD7Q8WVZ9 684 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 ATXN2LQ8WWM7 1075 aaKnown RBP22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 SEMA4DQ92854 862 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 TMEM209Q96SK2 561 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 PI4K2AQ9BTU6 479 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 DNAJC25Q9H1X3 360 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 SFXN1Q9H9B4 322 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 COQ4Q9Y3A0 265 aa22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.12■■□□□ 1.13
HMGXB4-203ENST00000420166 SPDYE4A6NLX3 237 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 GABRDO14764 452 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 N4BP1O75113 896 aaKnown RBP22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 FAM163BP0C2L3 166 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 WARSP23381 471 aaKnown RBP22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 LHX1P48742 406 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 NOP14P78316 857 aaKnown RBP22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 MYL7Q01449 175 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 NFKBIBQ15653 356 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 SPOPLQ6IQ16 392 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 FAM114A1Q8IWE2 563 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 C12orf76Q8N812 135 aaPredicted RBP22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 ZCWPW1Q9H0M4 648 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 SMYD3Q9H7B4 428 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 DDX43Q9NXZ2 648 aaKnown RBP22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 AFF4Q9UHB7 1163 aaKnown RBP22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 NFE2L3Q9Y4A8 694 aa22.11■■□□□ 1.13
HMGXB4-203ENST00000420166 PMM2O15305 246 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 TACC1O75410 805 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 P4HA1P13674 534 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 ATF2P15336 505 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 MRPS5P82675 430 aaKnown RBP22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 KCNH2Q12809 1159 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 GPR17Q13304 367 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 SMAD4Q13485 552 aaKnown RBP22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 RARS2Q5T160 578 aaKnown RBP22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 LIN9Q5TKA1 542 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 SCARA5Q6ZMJ2 495 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 RNF19BQ6ZMZ0 732 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 CREBRFQ8IUR6 639 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 MRPL45Q9BRJ2 306 aaKnown RBP22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 APOL5Q9BWW9 433 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 S1PR5Q9H228 398 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 APOBEC3GQ9HC16 384 aaKnown RBP22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.1■■□□□ 1.133e-16■■■■■ 205
HMGXB4-203ENST00000420166 RAB20Q9NX57 234 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 C2orf16Q68DN1 1984 aa22.1■■□□□ 1.13
HMGXB4-203ENST00000420166 SYCE3A1L190 88 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 LRRN2O75325 713 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 ZMYND10O75800 440 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 PCSK1P29120 753 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 MTIF2P46199 727 aaKnown RBP22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 CCDC150Q8NCX0 1101 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 CMASQ8NFW8 434 aaPredicted RBP22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 ACBD6Q9BR61 282 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 FUCA2Q9BTY2 467 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 SNX25Q9H3E2 840 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 SAMSN1Q9NSI8 373 aaKnown RBP22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 ZDHHC7Q9NXF8 308 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 MAGEC2Q9UBF1 373 aaPredicted RBP22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 MAFFQ9ULX9 164 aa22.09■■□□□ 1.13
HMGXB4-203ENST00000420166 GRXCR2A6NFK2 248 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 P4HA2O15460 535 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 MBTPS2O43462 519 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 HCRTO43612 131 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 RFPL2O75678 378 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 AFPP02771 609 aaKnown RBP22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 C8AP07357 584 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 ACAT1P24752 427 aaKnown RBP22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 ELF1P32519 619 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 ASPAP45381 313 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 KCNQ1P51787 676 aa22.08■■□□□ 1.13
HMGXB4-203ENST00000420166 TSPY1Q01534 308 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms