RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ERVK-9P63128 1117 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ERVK-24P63145 666 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 STK4Q13043 487 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 PDK1Q15118 436 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 E2F5Q15329 346 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 KLHL29Q96CT2 875 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 TSPAN17Q96FV3 270 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 DDX27Q96GQ7 796 aaKnown RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 RNPC3Q96LT9 517 aaKnown RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 MTG1Q9BT17 334 aaPredicted RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 EML4Q9HC35 981 aaKnown RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 C5P01031 1676 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 IRF6O14896 467 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 PRPF4O43172 522 aaKnown RBP eCLIP8.86□□□□□ -0.991e-7■□□□□ 10.3
UBR4-206ENST00000419533 MTSS1O43312 755 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 KDM1AO60341 852 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 LUC7L3O95232 432 aaKnown RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 AKT1P31749 480 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 SLC11A2P49281 568 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 INPP1P49441 399 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ARHGDIAP52565 204 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 FBXW4P57775 412 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 UGP2Q16851 508 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 Q4G0T1 1027 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 NUGGCQ68CJ6 796 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 METTL7BQ6UX53 244 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 SLC30A5Q8TAD4 765 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ABI2Q9NYB9 513 aaPredicted RBP8.86□□□□□ -0.99
UBR4-206ENST00000419533 ZFATQ9P243 1243 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 ATP11BQ9Y2G3 1177 aa8.86□□□□□ -0.99
UBR4-206ENST00000419533 STMN1P16949 149 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 HIF1AQ16665 826 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 FASTKD1Q53R41 847 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 GPAT2Q6NUI2 795 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 MFN1Q8IWA4 741 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 SLC35G2Q8TBE7 412 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 UCMAQ8WVF2 138 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 DDX47Q9H0S4 455 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 TLL2Q9Y6L7 1015 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 C4AP0C0L4 1744 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 A0A1B0GTH6 734 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 CFAP99D6REC4 459 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 SPECC1L-ADORA2AF8WAN1 911 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 C2CD2LO14523 706 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 WEE2P0C1S8 567 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 TGFB3P10600 412 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 PYGBP11216 843 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 RPL10AP62906 217 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 PKN2Q16513 984 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 DCAF6Q58WW2 860 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 TRIM68Q6AZZ1 485 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 ELOA2Q8IYF1 753 aaPredicted RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 LZICQ8WZA0 190 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 ARHGEF26Q96DR7 871 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 KRT82Q9NSB4 513 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 COL1A1P02452 1464 aaPredicted RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 NCAM1P13591 858 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 GTF2H1P32780 548 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 RAB27AP51159 221 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 ELAVL2Q12926 359 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 CAPRIN1Q14444 709 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 ARID5BQ14865 1188 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 SHCBP1Q8NEM2 672 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 C7orf43Q8WVR3 580 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 MRPS31Q92665 395 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 KDM4CQ9H3R0 1056 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 RSAD1Q9HA92 442 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 AIPL1Q9NZN9 384 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 THEGQ9P2T0 379 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 KIAA1257Q9ULG3 409 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 A0A0G2JND7 137 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 USP2O75604 605 aaPredicted RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 MORF4L2Q15014 288 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 C4orf22Q6V702 233 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 SYNDIG1Q9H7V2 258 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 KLK14Q9P0G3 267 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 PPARGC1AQ9UBK2 798 aaKnown RBP8.85□□□□□ -0.99
UBR4-206ENST00000419533 ADAM21Q9UKJ8 722 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 PCDHB12Q9Y5F1 795 aa8.85□□□□□ -0.99
UBR4-206ENST00000419533 MMEP08473 750 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 RFC1P35251 1148 aaPredicted RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 GALCP54803 685 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 PDAP1Q13442 181 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 CCDC138Q96M89 665 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 P2RX7Q99572 595 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 VTA1Q9NP79 307 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 SPATS2LQ9NUQ6 558 aaKnown RBP8.84□□□□□ -0.99
UBR4-206ENST00000419533 NSMCE4AQ9NXX6 385 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 KANSL3Q9P2N6 904 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 ANGPTL2Q9UKU9 493 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 ITM2BQ9Y287 266 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 NDUFS3O75489 264 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 B3GAT3O94766 335 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 AKR1A1P14550 325 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 KLRC1P26715 233 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 SHMT1P34896 483 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 CLCN3P51790 818 aa8.84□□□□□ -0.99
UBR4-206ENST00000419533 CDH18Q13634 790 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms