RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 STYXL1Q9Y6J8 313 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 MED19A0JLT2 244 aaPredicted RBP16.04■□□□□ 0.16
RPS28-201ENST00000417088 DDIT3P35638 169 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 ADALQ6DHV7 355 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 SLFN12LQ6IEE8 588 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 USP49Q70CQ1 688 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 CSGALNACT1Q8TDX6 532 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 CCSER1Q9C0I3 900 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 ZCWPW1Q9H0M4 648 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 ATXN3LQ9H3M9 355 aa16.04■□□□□ 0.16
RPS28-201ENST00000417088 AGO2Q9UKV8 859 aaKnown RBP16.04■□□□□ 0.16
RPS28-201ENST00000417088 SCN1AP35498 2009 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 FGF19O95750 216 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 GABRR2P28476 465 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 SOX9P48436 509 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 TUFMP49411 452 aaKnown RBP16.03■□□□□ 0.16
RPS28-201ENST00000417088 CCR3P51677 355 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 CDR1P51861 262 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 NRLP54845 237 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 GAS6Q14393 721 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 RSPO4Q2I0M5 234 aaPredicted RBP16.03■□□□□ 0.16
RPS28-201ENST00000417088 SLC39A12Q504Y0 691 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 GPR158Q5T848 1215 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 CRELD2Q6UXH1 353 aaPredicted RBP16.03■□□□□ 0.16
RPS28-201ENST00000417088 ZNF720Q7Z2F6 126 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 ITIH5Q86UX2 942 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 GPR161Q8N6U8 529 aaKnown RBP16.03■□□□□ 0.16
RPS28-201ENST00000417088 KRI1Q8N9T8 703 aaKnown RBP16.03■□□□□ 0.16
RPS28-201ENST00000417088 MSANTD3Q96H12 275 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 EPSTI1Q96J88 318 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 LPIN3Q9BQK8 851 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 C8orf33Q9H7E9 229 aaPredicted RBP16.03■□□□□ 0.16
RPS28-201ENST00000417088 DPP3Q9NY33 737 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 DSEQ9UL01 958 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 C2CD2Q9Y426 696 aa16.03■□□□□ 0.16
RPS28-201ENST00000417088 SLC38A8A6NNN8 435 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 DPYSL4O14531 572 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 CYB561D2O14569 222 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 ATF6P18850 670 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 CXCL12P48061 93 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 TAF6P49848 677 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.16
RPS28-201ENST00000417088 SATB1Q01826 763 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 POU5F1Q01860 360 aaKnown RBP16.02■□□□□ 0.16
RPS28-201ENST00000417088 PPP2R5DQ14738 602 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 ARHGAP15Q53QZ3 475 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 WDR44Q5JSH3 913 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 DYMQ7RTS9 669 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 LRRTM3Q86VH5 581 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 SFR1Q86XK3 245 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 EFCAB13Q8IY85 973 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 SECISBP2LQ93073 1101 aaKnown RBP16.02■□□□□ 0.16
RPS28-201ENST00000417088 SEPT5Q99719 369 aaPredicted RBP16.02■□□□□ 0.16
RPS28-201ENST00000417088 PYM1Q9BRP8 204 aaKnown RBP16.02■□□□□ 0.16
RPS28-201ENST00000417088 UPF2Q9HAU5 1272 aaKnown RBP16.02■□□□□ 0.16
RPS28-201ENST00000417088 IL21Q9HBE4 155 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.16
RPS28-201ENST00000417088 OBP2AQ9NY56 170 aa16.02■□□□□ 0.16
RPS28-201ENST00000417088 MYBPHLA2RUH7 354 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 PPP1R37O75864 691 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 TGM1P22735 817 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 WEE1P30291 646 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 ADSSP30520 456 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 CYP4F8P98187 520 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 PTPAQ15257 358 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 MGAT5BQ3V5L5 792 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 WSCD1Q658N2 575 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 C1orf228Q6PIY5 440 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 TXNDC11Q6PKC3 985 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 THEM5Q8N1Q8 247 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 SPEM1Q8N4L4 309 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 TTC8Q8TAM2 541 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 POMGNT1Q8WZA1 660 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 ZFYVE19Q96K21 471 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 STRA6Q9BX79 667 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 TASP1Q9H6P5 420 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 GTSE1Q9NYZ3 720 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 CLIC4Q9Y696 253 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 SPTBN2O15020 2390 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 ANK1P16157 1881 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 TSC2P49815 1807 aa16.01■□□□□ 0.15
RPS28-201ENST00000417088 SPECC1L-ADORA2AF8WAN1 911 aa16■□□□□ 0.15
RPS28-201ENST00000417088 HAPLN1P10915 354 aaPredicted RBP16■□□□□ 0.15
RPS28-201ENST00000417088 CTHP32929 405 aa16■□□□□ 0.15
RPS28-201ENST00000417088 SMARCB1Q12824 385 aa16■□□□□ 0.15
RPS28-201ENST00000417088 LRRC32Q14392 662 aa16■□□□□ 0.15
RPS28-201ENST00000417088 VEPH1Q14D04 833 aa16■□□□□ 0.15
RPS28-201ENST00000417088 POSTNQ15063 836 aa16■□□□□ 0.15
RPS28-201ENST00000417088 Q6ZS52 159 aa16■□□□□ 0.15
RPS28-201ENST00000417088 RALGPS2Q86X27 583 aaPredicted RBP16■□□□□ 0.15
RPS28-201ENST00000417088 CELF5Q8N6W0 485 aaKnown RBP16■□□□□ 0.15
RPS28-201ENST00000417088 SPPL2BQ8TCT7 592 aa16■□□□□ 0.15
RPS28-201ENST00000417088 GIPC2Q8TF65 315 aa16■□□□□ 0.15
RPS28-201ENST00000417088 C2orf15Q8WU43 125 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms