RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 MARCKSP29966 332 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 LRPAP1P30533 357 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 MATR3P43243 847 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 SLC12A3P55017 1021 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 FCHO2Q0JRZ9 810 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 PDIA5Q14554 519 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 SF3A2Q15428 464 aaKnown RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 ARSHQ5FYA8 562 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 GPR158Q5T848 1215 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 KRT79Q5XKE5 535 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 SCARA3Q6AZY7 606 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 SLC39A4Q6P5W5 647 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 MAMSTRQ6ZN01 415 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 PRR23CQ6ZRP0 262 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 SPEM1Q8N4L4 309 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 FAM160A2Q8N612 972 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 GPR161Q8N6U8 529 aaKnown RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 CELF5Q8N6W0 485 aaKnown RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 CSGALNACT1Q8TDX6 532 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 SPIRE2Q8WWL2 714 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 FAM84AQ96KN4 292 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 ZNF396Q96N95 335 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 NTPCRQ9BSD7 190 aaKnown RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 SMOC1Q9H4F8 434 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 RALYQ9UKM9 306 aaKnown RBP14.01□□□□□ -0.17
LINC00339-202ENST00000416769 RAB23Q9ULC3 237 aa14.01□□□□□ -0.17
LINC00339-202ENST00000416769 MYBPHLA2RUH7 354 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 OTOL1A6NHN0 477 aaPredicted RBP14□□□□□ -0.17
LINC00339-202ENST00000416769 CHADO15335 359 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 GABRR2P28476 465 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 STRN3Q13033 797 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 GPR17Q13304 367 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 FAM173BQ6P4H8 233 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 DSTYKQ6XUX3 929 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14□□□□□ -0.17
LINC00339-202ENST00000416769 DNAJB7Q7Z6W7 309 aaPredicted RBP14□□□□□ -0.17
LINC00339-202ENST00000416769 YAF2Q8IY57 180 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 FAM212AQ96EL1 285 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 ATXN3LQ9H3M9 355 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 IL21Q9HBE4 155 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 GREB1Q4ZG55 1949 aa14□□□□□ -0.17
LINC00339-202ENST00000416769 CLDN3O15551 220 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 CLTAP09496 248 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 PLA2G4BP0C869 781 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 NMT1P30419 496 aaKnown RBP13.99□□□□□ -0.17
LINC00339-202ENST00000416769 GPR15P49685 360 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 EPHB3P54753 998 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 NRLP54845 237 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 PLD1Q13393 1074 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 CCINQ13939 588 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 CCDC142Q17RM4 750 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 TRIM68Q6AZZ1 485 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 OVOS1Q6IE37 1185 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 JADE1Q6IE81 842 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 ZPBP2Q6X784 338 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 LRRTM3Q86VH5 581 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-202ENST00000416769 LEMD2Q8NC56 503 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 NETO1Q8TDF5 533 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 GIPC2Q8TF65 315 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 PSMG2Q969U7 264 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 BICD1Q96G01 975 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 BORCS6Q96GS4 357 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 SENP8Q96LD8 212 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 SEPT5Q99719 369 aaPredicted RBP13.99□□□□□ -0.17
LINC00339-202ENST00000416769 REEP2Q9BRK0 252 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 CFAP45Q9UL16 551 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 UBQLN1Q9UMX0 589 aaKnown RBP13.99□□□□□ -0.17
LINC00339-202ENST00000416769 CCL26Q9Y258 94 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 DENND4CQ5VZ89 1909 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 OBSL1O75147 1896 aa13.99□□□□□ -0.17
LINC00339-202ENST00000416769 VWA3AA6NCI4 1184 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 ANTXRLA6NF34 631 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 AXIN1O15169 862 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 BMP15O95972 392 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 NCKAP1LP55160 1127 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 PPP2R3AQ06190 1150 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 DHX8Q14562 1220 aaKnown RBP13.98□□□□□ -0.17
LINC00339-202ENST00000416769 CSRP2Q16527 193 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 TMEM119Q4V9L6 283 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 SLC39A12Q504Y0 691 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 HYIQ5T013 277 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 SDHAF4Q5VUM1 108 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 DTHD1Q6ZMT9 781 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 USP37Q86T82 979 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 TMEM150AQ86TG1 271 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 LONP2Q86WA8 852 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 SLC46A2Q9BY10 475 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 FBRSL1Q9HCM7 1045 aaKnown RBP13.98□□□□□ -0.17
LINC00339-202ENST00000416769 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
LINC00339-202ENST00000416769 ZNF638Q14966 1978 aaKnown RBP13.98□□□□□ -0.17
LINC00339-202ENST00000416769 TCHHQ07283 1943 aa13.98□□□□□ -0.17
LINC00339-202ENST00000416769 OR6C75A6NL08 312 aa13.97□□□□□ -0.17
LINC00339-202ENST00000416769 ANKRD63C9JTQ0 380 aa13.97□□□□□ -0.17
LINC00339-202ENST00000416769 SDHBP21912 280 aa13.97□□□□□ -0.17
LINC00339-202ENST00000416769 PRPHP41219 470 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms