RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ACADSBP45954 432 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 VPS41P49754 854 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 EIF3BP55884 814 aaKnown RBP21.49■■□□□ 1.03
AP1S3-205ENST00000415298 BAATQ14032 418 aaPredicted RBP21.49■■□□□ 1.03
AP1S3-205ENST00000415298 COL19A1Q14993 1142 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.49■■□□□ 1.03
AP1S3-205ENST00000415298 CAPNS2Q96L46 248 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 PORCNQ9H237 461 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 PRKAG3Q9UGI9 489 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 FBXL5Q9UKA1 691 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 RABGAP1Q9Y3P9 1069 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 NOTOA8MTQ0 251 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 FOXN1O15353 648 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 ERVK-9P63128 1117 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 CRY1Q16526 586 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 TTC38Q5R3I4 469 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 SATL1Q86VE3 508 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 RIOX2Q8IUF8 465 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 ACMSDQ8TDX5 336 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 ZNF304Q9HCX3 659 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 FKBP14Q9NWM8 211 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 GTF3C4Q9UKN8 822 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 MZF1P28698 734 aaPredicted RBP21.48■■□□□ 1.03
AP1S3-205ENST00000415298 ECHS1P30084 290 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 HSD17B4P51659 736 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 PTPAQ15257 358 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 KHDC1Q4VXA5 237 aaKnown RBP21.48■■□□□ 1.03
AP1S3-205ENST00000415298 AGAP9Q5VTM2 703 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 RNF43Q68DV7 783 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 RNF207Q6ZRF8 634 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 MRGBPQ9NV56 204 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 CPA4Q9UI42 421 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 KCNH3Q9ULD8 1083 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 VILLO15195 856 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 OR6B1O95007 311 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 IGBP1P78318 339 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 OSTM1Q86WC4 334 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 VPS37AQ8NEZ2 397 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 SYTL5Q8TDW5 730 aaPredicted RBP21.48■■□□□ 1.03
AP1S3-205ENST00000415298 COX4I2Q96KJ9 171 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 TAAR1Q96RJ0 339 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 TBC1D10AQ9BXI6 508 aa21.48■■□□□ 1.03
AP1S3-205ENST00000415298 FAF1Q9UNN5 650 aaPredicted RBP21.48■■□□□ 1.03
AP1S3-205ENST00000415298 CCNT1O60563 726 aaKnown RBP21.47■■□□□ 1.03
AP1S3-205ENST00000415298 EIF2S1P05198 315 aaKnown RBP21.47■■□□□ 1.03
AP1S3-205ENST00000415298 TAF1CQ15572 869 aaPredicted RBP21.47■■□□□ 1.03
AP1S3-205ENST00000415298 TRIM71Q2Q1W2 868 aaKnown RBP21.47■■□□□ 1.03
AP1S3-205ENST00000415298 VWA3BQ502W6 1294 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 LMBRD2Q68DH5 695 aaPredicted RBP21.47■■□□□ 1.03
AP1S3-205ENST00000415298 C1orf228Q6PIY5 440 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 TAOK1Q7L7X3 1001 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 GIPC3Q8TF64 312 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 GLT8D2Q9H1C3 349 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 ACAD9Q9H845 621 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 USP29Q9HBJ7 922 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 ZNHIT2Q9UHR6 403 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 A0A088AWK7 358 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 TDP2O95551 362 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 TMTC4Q5T4D3 741 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 NEK8Q86SG6 692 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 GIPC2Q8TF65 315 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 PSMB7Q99436 277 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 KRT12Q99456 494 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 VTA1Q9NP79 307 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 COMMD8Q9NX08 183 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 ZNF212Q9UDV6 495 aa21.47■■□□□ 1.03
AP1S3-205ENST00000415298 UMODL1Q5DID0 1318 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 FUOMA2VDF0 154 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 MYBP10242 640 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 PRKACBP22694 351 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 WDR59Q6PJI9 974 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 PARK7Q99497 189 aaKnown RBP21.46■■□□□ 1.03
AP1S3-205ENST00000415298 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.46■■□□□ 1.03
AP1S3-205ENST00000415298 KIAA1257Q9ULG3 409 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 NPHP3-ACAD11A0A0J9YXS1 232 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 CAPN9O14815 690 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 OPHN1O60890 802 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 CLASP2O75122 1294 aaKnown RBP21.46■■□□□ 1.03
AP1S3-205ENST00000415298 SERPINB6P35237 376 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 GRIA2P42262 883 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 NELFCDQ8IXH7 590 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 KBTBD2Q8IY47 623 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 GPRC5AQ8NFJ5 357 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 CYP2W1Q8TAV3 490 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 KRT82Q9NSB4 513 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 FGFR1OP2Q9NVK5 253 aa21.46■■□□□ 1.03
AP1S3-205ENST00000415298 ANKRD34BA5PLL1 514 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 PIM1P11309 404 aaPredicted RBP21.45■■□□□ 1.02
AP1S3-205ENST00000415298 PHBP35232 272 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 TM4SF4P48230 202 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 NEK3P51956 506 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 GRIN1Q05586 938 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 AP3B2Q13367 1082 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 LPIN1Q14693 890 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 PCNX4Q63HM2 1172 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 CRYGNQ8WXF5 182 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 TMEM60Q9H2L4 133 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 METTL14Q9HCE5 456 aaKnown RBP21.45■■□□□ 1.02
AP1S3-205ENST00000415298 KLHL14Q9P2G3 628 aa21.45■■□□□ 1.02
AP1S3-205ENST00000415298 LIMA1Q9UHB6 759 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms