RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PRSS55Q6UWB4 352 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-207ENST00000415107 METTL23Q86XA0 190 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 CEP57Q86XR8 500 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 AUTS2Q8WXX7 1259 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 SEMA4DQ92854 862 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 JAKMIP2Q96AA8 810 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 PABPC5Q96DU9 382 aaKnown RBP12.77□□□□□ -0.37
ATG4B-207ENST00000415107 B3GALT6Q96L58 329 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 FAM81BQ96LP2 452 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 RTP3Q9BQQ7 232 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 TLE6Q9H808 572 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
ATG4B-207ENST00000415107 CBX8Q9HC52 389 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 FBXL5Q9UKA1 691 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 DAAM1Q9Y4D1 1078 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
ATG4B-207ENST00000415107 MYO7AQ13402 2215 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 BECN2A8MW95 431 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 POU2F2P09086 479 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 SRGAP2BP0DMP2 458 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 IGFBP4P22692 258 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 TBXAS1P24557 533 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-207ENST00000415107 PCSK1P29120 753 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 ROR1Q01973 937 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 GPR17Q13304 367 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 WDR44Q5JSH3 913 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 C2orf15Q8WU43 125 aaKnown RBP12.76□□□□□ -0.37
ATG4B-207ENST00000415107 PKMYT1Q99640 499 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 ANP32EQ9BTT0 268 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 ZCWPW1Q9H0M4 648 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 TSPY26PQ9H489 355 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 PLEKHA4Q9H4M7 779 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 DZANK1Q9NVP4 752 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 GCNT4Q9P109 453 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 FBXW11Q9UKB1 542 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 PCDHGC5Q9Y5F6 944 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 CDY1Q9Y6F8 540 aa12.76□□□□□ -0.37
ATG4B-207ENST00000415107 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 WDR27A2RRH5 827 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 C2CD2LO14523 706 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 GLUD1P00367 558 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 TPM2P07951 284 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 ATF2P15336 505 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 HOXB8P17481 243 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 RFX1P22670 979 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 HOXA9P31269 272 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 NRIP1P48552 1158 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 ADAM15Q13444 863 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 EXOC3L4Q17RC7 722 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 INTS6LQ5JSJ4 861 aaKnown RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 TRIM65Q6PJ69 517 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 ELMSAN1Q6PJG2 1045 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 GBP6Q6ZN66 633 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 UBR7Q8N806 425 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 CMASQ8NFW8 434 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 OR10T2Q8NGX3 314 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 CASP10Q92851 521 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 DDX43Q9NXZ2 648 aaKnown RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 AFF4Q9UHB7 1163 aaKnown RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 CDH9Q9ULB4 789 aa12.75□□□□□ -0.37
ATG4B-207ENST00000415107 TIMM13Q9Y5L4 95 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-207ENST00000415107 MTCL1Q9Y4B5 1905 aaKnown RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 LGALS16A8MUM7 142 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 TGM5O43548 720 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 LRRN2O75325 713 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 GLP2RO95838 553 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 KLRC2P26717 231 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 OR1D2P34982 312 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 YWHAEP62258 255 aaKnown RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 TPM4P67936 248 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 TSPY1Q01534 308 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 CUL2Q13617 745 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 MAPRE1Q15691 268 aaKnown RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 NFE2Q16621 373 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 SPOPLQ6IQ16 392 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 FAM171BQ6P995 826 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 TCEAL8Q8IYN2 117 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 VN1R2Q8NFZ6 395 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 MAFAQ8NHW3 353 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 NT5C1BQ96P26 610 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 ERGIC2Q96RQ1 377 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms