RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SPRED2Q7Z698 418 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 CDH24Q86UP0 819 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 HSCBQ8IWL3 235 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 TPH2Q8IWU9 490 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 TMEM130Q8N3G9 435 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 ARHGEF39Q8N4T4 335 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 HERVK_113Q902F9 699 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 FAM20AQ96MK3 541 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 MTMR9Q96QG7 549 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 CEP89Q96ST8 783 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 NAP1L4Q99733 375 aaKnown RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 EIF2AK1Q9BQI3 630 aaKnown RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 LXNQ9BS40 222 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 TARS2Q9BW92 718 aaKnown RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 NKX2-4Q9H2Z4 354 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 INTS7Q9NVH2 962 aaKnown RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 MAGEC2Q9UBF1 373 aaPredicted RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 FBXL21Q9UKT6 434 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 PCDHA12Q9UN75 941 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 YBX2Q9Y2T7 364 aaKnown RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 PCDHA2Q9Y5H9 948 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 TRPV2Q9Y5S1 764 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 SLC4A7Q9Y6M7 1214 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 RALGAPA2Q2PPJ7 1873 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 COL6A3P12111 3177 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 TCHHQ07283 1943 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 SMIM35A0A1B0GVV1 85 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 LCHNA4D1U4 455 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 KRBA1A5PL33 1030 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 TBX3O15119 743 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 MED24O75448 989 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 CSDE1O75534 798 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 SLITRK3O94933 977 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 ARHGEF15O94989 841 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 CXCL10P02778 98 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 HSP90AA1P07900 732 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 ITGA4P13612 1032 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 ATP2A2P16615 1042 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 SYT1P21579 422 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 FGFR4P22455 802 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 CDC25AP30304 524 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 GMPRP36959 345 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 QARSP47897 775 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 ZNF445P59923 1031 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 PSMC5P62195 406 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 CEBPZQ03701 1054 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 EPHA7Q15375 998 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 ZRSR1Q15695 479 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 IL17AQ16552 155 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 XKR9Q5GH70 373 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 XKR3Q5GH77 459 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 FBXO47Q5MNV8 452 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 EFCAB12Q6NXP0 572 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 TAF2Q6P1X5 1199 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 MAEAQ7L5Y9 396 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 RSPH3Q86UC2 560 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 KSR1Q8IVT5 923 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 TRIM59Q8IWR1 403 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 KIAA0319LQ8IZA0 1049 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 MYOCDQ8IZQ8 938 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 AGGF1Q8N302 714 aaeCLIP5.42□□□□□ -1.54
VPS41-205ENST00000414632 DEFB123Q8N688 67 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 C4orf32Q8N8J7 132 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 RDM1Q8NG50 284 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 ATL2Q8NHH9 583 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 SLC7A14Q8TBB6 771 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 PIGOQ8TEQ8 1089 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 BTN2A2Q8WVV5 523 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 DDX1Q92499 740 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 SEPT8Q92599 483 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 TNPO1Q92973 898 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 FAM167AQ96KS9 214 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 CEP170P1Q96L14 293 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 SCLT1Q96NL6 688 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 MIPEPQ99797 713 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 IFIH1Q9BYX4 1025 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 CELF4Q9BZC1 486 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 MTIF3Q9H2K0 278 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 TTYH1Q9H313 450 aaPredicted RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 ACSS3Q9H6R3 686 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 AGO3Q9H9G7 860 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 CERS4Q9HA82 394 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 POLD4Q9HCU8 107 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 NRBP2Q9NSY0 501 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 MCM8Q9UJA3 840 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 MTUS1Q9ULD2 1270 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 NOC2LQ9Y3T9 749 aaKnown RBP5.42□□□□□ -1.54
VPS41-205ENST00000414632 PLXNA4Q9HCM2 1894 aa5.42□□□□□ -1.54
VPS41-205ENST00000414632 COL4A6Q14031 1691 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 MYO9BQ13459 2157 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 VWA3AA6NCI4 1184 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 F8W735 103 aaPredicted RBP5.41□□□□□ -1.54
VPS41-205ENST00000414632 M0QZ92 97 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 RFXAPO00287 272 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 DLX3O60479 287 aa5.41□□□□□ -1.54
VPS41-205ENST00000414632 CAND2O75155 1236 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms