RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TDRD12Q587J7 1177 aaKnown RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 SFMBT2Q5VUG0 894 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 WDR93Q6P2C0 686 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 ZNF280BQ86YH2 543 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 LMO3Q8TAP4 145 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 RPS6KC1Q96S38 1066 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 SLC9A7Q96T83 725 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 CRACR2AQ9BSW2 395 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 GANQ9H2C0 597 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 TUBGCP4Q9UGJ1 667 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 SIX4Q9UIU6 781 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 INPP5FQ9Y2H2 1132 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 MYH10P35580 1976 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 TBKBP1A7MCY6 615 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 LRRN2O75325 713 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 DDHD2O94830 711 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 MAGEA1P43355 309 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 MXI1P50539 228 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 GUCY2FP51841 1108 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 GFPT1Q06210 699 aaPredicted RBP10.65□□□□□ -0.7
DDB1-202ENST00000414411 TUSC3Q13454 348 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 EPC2Q52LR7 807 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 DPY19L2P1Q6NXN4 242 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 HERC6Q8IVU3 1022 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 ABI1Q8IZP0 508 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 TXLNBQ8N3L3 684 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 ANKRD36BP1Q96IX9 119 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 CAPZA3Q96KX2 299 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 ALS2CR12Q96Q35 445 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 UBE2OQ9C0C9 1292 aaKnown RBP10.65□□□□□ -0.7
DDB1-202ENST00000414411 MTIF3Q9H2K0 278 aaKnown RBP10.65□□□□□ -0.7
DDB1-202ENST00000414411 SNX12Q9UMY4 172 aa10.65□□□□□ -0.7
DDB1-202ENST00000414411 PIRO00625 290 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 XPOTO43592 962 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 N4BP1O75113 896 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 MOCS3O95396 460 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 TNNC2P02585 160 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 FAM193AP78312 1265 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 APBA1Q02410 837 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 FAM117BQ6P1L5 589 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 FBXL13Q8NEE6 735 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 BEST2Q8NFU1 509 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 URGCPQ8TCY9 931 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 TAS1R2Q8TE23 839 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 SEMA4DQ92854 862 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 RAD9AQ99638 391 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 MRPL9Q9BYD2 267 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 PRO3102Q9H379 93 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 CWH43Q9H720 699 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 GOLGA2P5Q9HBQ8 144 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 ABCB6Q9NP58 842 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 ITGA11Q9UKX5 1188 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 L1RE1Q9UN81 338 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 ZNF185O15231 689 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 HLA-DRAP01903 254 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 ITGB3P05106 788 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 PRLRP16471 622 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 IGFBP6P24592 240 aaPredicted RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 RPL9P32969 192 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 MYL7Q01449 175 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 NCOA4Q13772 614 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 RAPGEF1Q13905 1077 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 UPP1Q16831 310 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 C9orf57Q5W0N0 161 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 CD300LGQ6UXG3 332 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 HDXQ7Z353 690 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 CMTR2Q8IYT2 770 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 SP7Q8TDD2 431 aaPredicted RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 RNPC3Q96LT9 517 aaKnown RBP10.64□□□□□ -0.71
DDB1-202ENST00000414411 PAAF1Q9BRP4 392 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 XYLT2Q9H1B5 865 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 NRDE2Q9H7Z3 1164 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 PLCB1Q9NQ66 1216 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 RAB20Q9NX57 234 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 AIPL1Q9NZN9 384 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 SALL4Q9UJQ4 1053 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 PRDM4Q9UKN5 801 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 INSL6Q9Y581 213 aa10.64□□□□□ -0.71
DDB1-202ENST00000414411 TARSL2A2RTX5 802 aaKnown RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 PDE2AO00408 941 aaPredicted RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 PPEF2O14830 753 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 LINC00271P0C7V0 271 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 SLC9A1P19634 815 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 PON1P27169 355 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 OAS2P29728 719 aaKnown RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 CLCNKBP51801 687 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 MYL6P60660 151 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 RBP5P82980 135 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 MLLT1Q03111 559 aaPredicted RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 RNASELQ05823 741 aaKnown RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 CETN1Q12798 172 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 BIRC3Q13489 604 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 FAM109BQ6ICB4 259 aaPredicted RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 IQCEQ6IPM2 695 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms