RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ALDH1A3P47895 512 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 TUFMP49411 452 aaKnown RBP15.79■□□□□ 0.12
CHD1-202ENST00000414220 CASP4P49662 377 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 CLDN10P78369 228 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 CAMK4Q16566 473 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 NFE2Q16621 373 aaPredicted RBP15.79■□□□□ 0.12
CHD1-202ENST00000414220 SGSM1Q2NKQ1 1148 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 ZNF512Q96ME7 567 aaPredicted RBP15.79■□□□□ 0.12
CHD1-202ENST00000414220 ACBD6Q9BR61 282 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 DNAI2Q9GZS0 605 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 DDX43Q9NXZ2 648 aaKnown RBP15.79■□□□□ 0.12
CHD1-202ENST00000414220 KIAA1468Q9P260 1216 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 HSFX1Q9UBD0 423 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 SIX4Q9UIU6 781 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 TCF20Q9UGU0 1960 aaKnown RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 CLUHO75153 1309 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 PTPRJQ12913 1337 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 BIN1O00499 593 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 SLC16A3O15427 465 aaKnown RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 AKAP3O75969 853 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 STAU1O95793 577 aaKnown RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 CST3P01034 146 aaPredicted RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 GBP2P32456 591 aaPredicted RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 EPHB3P54753 998 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 NCOA4Q13772 614 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 MORC3Q14149 939 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 WDR72Q3MJ13 1102 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 SLC39A12Q504Y0 691 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 ZCWPW2Q504Y3 356 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 ZNF667Q5HYK9 610 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 RNF19BQ6ZMZ0 732 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 ADGRF2Q8IZF7 708 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 CXorf38Q8TB03 319 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 SPPL2BQ8TCT7 592 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 TAF4BQ92750 862 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 ZNF707Q96C28 371 aaPredicted RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 ZCWPW1Q9H0M4 648 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 SNX25Q9H3E2 840 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 METTL14Q9HCE5 456 aaKnown RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHD1-202ENST00000414220 L1RE1Q9UN81 338 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 INSL5Q9Y5Q6 135 aa15.78■□□□□ 0.12
CHD1-202ENST00000414220 ZFP37Q9Y6Q3 630 aaPredicted RBP15.78■□□□□ 0.12
CHD1-202ENST00000414220 ZNF197O14709 1029 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 C4BPAP04003 597 aaKnown RBP15.77■□□□□ 0.12
CHD1-202ENST00000414220 OR4Q2P0C623 313 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 FSHRP23945 695 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 GTF2H1P32780 548 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 MAPRE1Q15691 268 aaKnown RBP15.77■□□□□ 0.12
CHD1-202ENST00000414220 ZNF699Q32M78 642 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 CYP4A22Q5TCH4 519 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 ANKRD40Q6AI12 368 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 KLHL10Q6JEL2 608 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 FOXR2Q6PJQ5 311 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 GRASPQ7Z6J2 395 aaPredicted RBP15.77■□□□□ 0.12
CHD1-202ENST00000414220 RNF135Q8IUD6 432 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 ZDHHC14Q8IZN3 488 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 LEMD2Q8NC56 503 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 ZNF516Q92618 1163 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 PGLYRP2Q96PD5 576 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 DACH1Q9UI36 760 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 PCDHB5Q9Y5E4 795 aa15.77■□□□□ 0.12
CHD1-202ENST00000414220 REV3LO60673 3130 aa15.77■□□□□ 0.11
CHD1-202ENST00000414220 UNC80Q8N2C7 3258 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 SP100P23497 879 aaPredicted RBP15.76■□□□□ 0.11
CHD1-202ENST00000414220 PIK3CAP42336 1068 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 TWF1Q12792 350 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 DUSP4Q13115 394 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 PAK1Q13153 545 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 VEPH1Q14D04 833 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 TAF12Q16514 161 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 MGAT5BQ3V5L5 792 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 ZACNQ401N2 412 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 PABPC1LQ4VXU2 614 aaKnown RBP15.76■□□□□ 0.11
CHD1-202ENST00000414220 TCERG1LQ5VWI1 586 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 TDRD10Q5VZ19 366 aaKnown RBP15.76■□□□□ 0.11
CHD1-202ENST00000414220 KRT39Q6A163 491 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 ITIH5Q86UX2 942 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 FAM200AQ8TCP9 573 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 NELFBQ8WX92 580 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 FAM84AQ96KN4 292 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 CEP63Q96MT8 703 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 CLSTN2Q9H4D0 955 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 VRTNQ9H8Y1 702 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 LMBRD1Q9NUN5 540 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 NXF1Q9UBU9 619 aaKnown RBP15.76■□□□□ 0.11
CHD1-202ENST00000414220 ARMCX3Q9UH62 379 aaPredicted RBP15.76■□□□□ 0.11
CHD1-202ENST00000414220 CDH9Q9ULB4 789 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 ASB3Q9Y575 518 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 VWA8A3KMH1 1905 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 ANK1P16157 1881 aa15.76■□□□□ 0.11
CHD1-202ENST00000414220 MTMR11A4FU01 709 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 C2CD4DB7Z1M9 353 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 DCXO43602 365 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 TACC1O75410 805 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 SEC24AO95486 1093 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 GNA14O95837 355 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 WARSP23381 471 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms