RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KXD1Q9BQD3 176 aa28.35■■■□□ 2.13
VEGFA-207ENST00000413642 DNAJC25Q9H1X3 360 aa28.35■■■□□ 2.13
VEGFA-207ENST00000413642 KIAA1586Q9HCI6 787 aa28.35■■■□□ 2.13
VEGFA-207ENST00000413642 AVENQ9NQS1 362 aaPredicted RBP28.35■■■□□ 2.13
VEGFA-207ENST00000413642 FBXL21Q9UKT6 434 aa28.35■■■□□ 2.13
VEGFA-207ENST00000413642 L1RE1Q9UN81 338 aa28.35■■■□□ 2.13
VEGFA-207ENST00000413642 MYL4P12829 197 aa28.34■■■□□ 2.13
VEGFA-207ENST00000413642 THEM5Q8N1Q8 247 aa28.34■■■□□ 2.13
VEGFA-207ENST00000413642 PDCL2Q8N4E4 241 aa28.34■■■□□ 2.13
VEGFA-207ENST00000413642 XXYLT1Q8NBI6 393 aa28.34■■■□□ 2.13
VEGFA-207ENST00000413642 CCDC127Q96BQ5 260 aa28.34■■■□□ 2.13
VEGFA-207ENST00000413642 ARIH1Q9Y4X5 557 aaPredicted RBP28.34■■■□□ 2.13
VEGFA-207ENST00000413642 SCN1AP35498 2009 aa28.34■■■□□ 2.13
VEGFA-207ENST00000413642 NOTCH4Q99466 2003 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 DOCK8Q8NF50 2099 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 MOSPD3O75425 235 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 SRFP11831 508 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 SURF1Q15526 300 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 IQCEQ6IPM2 695 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 PDZD4Q76G19 769 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-207ENST00000413642 SIX5Q8N196 739 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 ELMOD1Q8N336 334 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 LRRC52Q8N7C0 313 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 GPR152Q8TDT2 470 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 ANKRD36BP1Q96IX9 119 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 GZF1Q9H116 711 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-207ENST00000413642 MFSD1Q9H3U5 465 aa28.33■■■□□ 2.13
VEGFA-207ENST00000413642 RPN1P04843 607 aaKnown RBP28.32■■■□□ 2.12
VEGFA-207ENST00000413642 DLATP10515 647 aaKnown RBP28.32■■■□□ 2.12
VEGFA-207ENST00000413642 NPR3P17342 541 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 PLA2G5P39877 138 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 SNRPFP62306 86 aaKnown RBP28.32■■■□□ 2.12
VEGFA-207ENST00000413642 CYP24A1Q07973 514 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 CYP4A22Q5TCH4 519 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 KRBA2Q6ZNG9 492 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 OSTM1Q86WC4 334 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 TMEM105Q8N8V8 129 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 PRSS33Q8NF86 280 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 FAM122AQ96E09 287 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 LRRC3Q9BY71 257 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 TMLHEQ9NVH6 421 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 CA14Q9ULX7 337 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 SNX9Q9Y5X1 595 aa28.32■■■□□ 2.12
VEGFA-207ENST00000413642 KRBA1A5PL33 1030 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 HCRTO43612 131 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 TNNC2P02585 160 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 GPC5P78333 572 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 PSMD2Q13200 908 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 PSMD6Q15008 389 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 DUOXA2Q1HG44 320 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 WDR49Q8IV35 697 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 C12orf56Q8IXR9 622 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 FLCNQ8NFG4 579 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 ZSWIM3Q96MP5 696 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 PLA2G2FQ9BZM2 168 aa28.31■■■□□ 2.12
VEGFA-207ENST00000413642 TSC2P49815 1807 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 HUS1O60921 280 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 ZNF202O95125 648 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 ACAT1P24752 427 aaKnown RBP28.3■■■□□ 2.12
VEGFA-207ENST00000413642 ALDH1A3P47895 512 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 DPYDQ12882 1025 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 CWF19L1Q69YN2 538 aaKnown RBP28.3■■■□□ 2.12
VEGFA-207ENST00000413642 MTSS1LQ765P7 747 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 TRAPPC11Q7Z392 1133 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 PLEKHO2Q8TD55 490 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 ZNF516Q92618 1163 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 HPDLQ96IR7 371 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 CGRRF1Q99675 332 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 SEPT5Q99719 369 aaPredicted RBP28.3■■■□□ 2.12
VEGFA-207ENST00000413642 ZNF334Q9HCZ1 680 aaPredicted RBP28.3■■■□□ 2.12
VEGFA-207ENST00000413642 ASAH2Q9NR71 780 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 GDAP2Q9NXN4 497 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 GDE1Q9NZC3 331 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 WNT16Q9UBV4 365 aa28.3■■■□□ 2.12
VEGFA-207ENST00000413642 ZNF197O14709 1029 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 PI15O43692 258 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 EXOC3O60645 756 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 CST3P01034 146 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-207ENST00000413642 TNNI1P19237 187 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 CASP4P49662 377 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 EPHB3P54753 998 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 EPHA5P54756 1037 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 CCDC142Q17RM4 750 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 MGAT5BQ3V5L5 792 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 TANGO2Q6ICL3 276 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 TMC8Q8IU68 726 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 LPIN3Q9BQK8 851 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 KCTD10Q9H3F6 313 aa28.29■■■□□ 2.12
VEGFA-207ENST00000413642 DDX43Q9NXZ2 648 aaKnown RBP28.29■■■□□ 2.12
VEGFA-207ENST00000413642 MYL1P05976 194 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 ATF6P18850 670 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 NUCB2P80303 420 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 PLD1Q13393 1074 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 TEAD2Q15562 447 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 SOWAHAQ2M3V2 549 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 FAM78AQ5JUQ0 283 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 ASTLQ6HA08 431 aaPredicted RBP28.28■■■□□ 2.12
VEGFA-207ENST00000413642 DNAJB7Q7Z6W7 309 aaPredicted RBP28.28■■■□□ 2.12
VEGFA-207ENST00000413642 SHKBP1Q8TBC3 707 aa28.28■■■□□ 2.12
VEGFA-207ENST00000413642 FNBP1Q96RU3 617 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms