RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SSR1P43307 286 aaKnown RBP18.59■□□□□ 0.57
SDCBP-202ENST00000413219 VCPP55072 806 aaKnown RBP18.59■□□□□ 0.57
SDCBP-202ENST00000413219 OASLQ15646 514 aaKnown RBP18.59■□□□□ 0.57
SDCBP-202ENST00000413219 TBC1D10BQ4KMP7 808 aaPredicted RBP18.59■□□□□ 0.57
SDCBP-202ENST00000413219 C2CD6Q53TS8 623 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 BRDTQ58F21 947 aaPredicted RBP18.59■□□□□ 0.57
SDCBP-202ENST00000413219 C4orf50Q6ZRC1 276 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 APBB1IPQ7Z5R6 666 aaPredicted RBP18.59■□□□□ 0.57
SDCBP-202ENST00000413219 MCF2L2Q86YR7 1114 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ZBED8Q8IZ13 594 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 TTC8Q8TAM2 541 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ELMO3Q96BJ8 720 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ALKBH8Q96BT7 664 aaKnown RBP18.59■□□□□ 0.57
SDCBP-202ENST00000413219 SH2D3AQ9BRG2 576 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 USTQ9Y2C2 406 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 A0A1W2PPM1 405 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 LRRD1A4D1F6 860 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 WDR64B1ANS9 1081 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 AHCYL1O43865 530 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ITGAVP06756 1048 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 FESP07332 822 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 PHBP35232 272 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 GJC1P36383 396 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 KLC1Q07866 573 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ZACNQ401N2 412 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 PCGF5Q86SE9 256 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ZNF516Q92618 1163 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 SH3GL3Q99963 347 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 KIFC3Q9BVG8 833 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 VPS11Q9H270 941 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 CCPG1Q9ULG6 757 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 DPPA5A6NC42 116 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 ENTPD5O75356 428 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 HLA-DRAP01903 254 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 ZSCAN5DPP0CG00 497 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 FGFR1P11362 822 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 KRT4P19013 534 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 VHLP40337 213 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 CTCFP49711 727 aaPredicted RBP18.58■□□□□ 0.57
SDCBP-202ENST00000413219 MRPS9P82933 396 aaKnown RBP18.58■□□□□ 0.57
SDCBP-202ENST00000413219 PDIA2Q13087 525 aaKnown RBP18.58■□□□□ 0.57
SDCBP-202ENST00000413219 PSMD6Q15008 389 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 SLC27A3Q5K4L6 730 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 PLA2G4FQ68DD2 849 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 MTDHQ86UE4 582 aaKnown RBP18.58■□□□□ 0.57
SDCBP-202ENST00000413219 DHRS4Q9BTZ2 278 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 YIPF3Q9GZM5 350 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 NPHS2Q9NP85 383 aa18.58■□□□□ 0.57
SDCBP-202ENST00000413219 KDM4FA0A1W2PPD8 638 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
SDCBP-202ENST00000413219 KRT1P04264 644 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 KRT10P13645 584 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 ABCD1P33897 745 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 PTGER2P43116 358 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 KRT76Q01546 638 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 MAPK6Q16659 721 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 IRGCQ6NXR0 463 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 ADGRD1Q6QNK2 874 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 MFSD7Q6UXD7 560 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 SPOCD1Q6ZMY3 1216 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 NLRX1Q86UT6 975 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 ZNF276Q8N554 614 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 SUPT20HQ8NEM7 779 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 RDM1Q8NG50 284 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 BSNDQ8WZ55 320 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 MASTLQ96GX5 879 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 ZNF333Q96JL9 665 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 FAM213AQ9BRX8 229 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 BTBD10Q9BSF8 475 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 RABGEF1Q9UJ41 708 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 CNTN6Q9UQ52 1028 aa18.58■□□□□ 0.56
SDCBP-202ENST00000413219 HNRNPDLO14979 420 aaKnown RBP18.57■□□□□ 0.56
SDCBP-202ENST00000413219 NVLO15381 856 aaKnown RBP18.57■□□□□ 0.56
SDCBP-202ENST00000413219 EXTL3O43909 919 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 DNAJC6O75061 913 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 GNA15P30679 374 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 PEX19P40855 299 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 GPX6P59796 221 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 SEPT7Q16181 437 aaKnown RBP18.57■□□□□ 0.56
SDCBP-202ENST00000413219 MUM1Q2TAK8 710 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 KLHL38Q2WGJ6 581 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 ATP11CQ8NB49 1132 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 CLEC4DQ8WXI8 215 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 PTCD3Q96EY7 689 aaKnown RBP18.57■□□□□ 0.56
SDCBP-202ENST00000413219 MIPEPQ99797 713 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 CADM1Q9BY67 442 aaKnown RBP18.57■□□□□ 0.56
SDCBP-202ENST00000413219 FBXO28Q9NVF7 368 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 MAP3K20Q9NYL2 800 aaKnown RBP18.57■□□□□ 0.56
SDCBP-202ENST00000413219 KANSL3Q9P2N6 904 aa18.57■□□□□ 0.56
SDCBP-202ENST00000413219 TMEM191CA6NGB0 347 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 PI4K2BG5E9Z4 385 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 HAUS5O94927 633 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 C4BPAP04003 597 aaKnown RBP18.56■□□□□ 0.56
SDCBP-202ENST00000413219 TMEM191BP0C7N4 346 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 ETS1P14921 441 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 TSHRP16473 764 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 ATF7P17544 494 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-202ENST00000413219 PIK3CAP42336 1068 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 RTP1P59025 263 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 OCRLQ01968 901 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms