RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 MRPL39Q9NYK5 338 aaKnown RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 SLIT3O75094 1523 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PVALEFA0A1B0GWK0 134 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PTPDC1A2A3K4 754 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 MIF4GDA9UHW6 222 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 GOLGA8RI6L899 631 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ADAM11O75078 769 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ATP5HO75947 161 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 DNAJB5O75953 348 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CDC27P30260 824 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 SEPHS1P49903 392 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 NEK3P51956 506 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 HK2P52789 917 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 NLRP11P59045 1033 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 RPL26P61254 145 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 FKBP4Q02790 459 aaKnown RBP eCLIP5.49□□□□□ -1.53
HERC4-205ENST00000412272 TAP1Q03518 808 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 FMR1Q06787 632 aaKnown RBP eCLIP5.49□□□□□ -1.53
HERC4-205ENST00000412272 CSTF3Q12996 717 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 ACVR2BQ13705 512 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 GIT2Q14161 759 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PXDC1Q5TGL8 231 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ZNF658Q5TYW1 1059 aaPredicted RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 ANO1Q5XXA6 986 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 OTOP3Q7RTS5 596 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 GPR141Q7Z602 305 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 STRA8Q7Z7C7 330 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ZNF677Q86XU0 584 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 GALNT13Q8IUC8 556 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 FOXP4Q8IVH2 680 aaPredicted RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 NKAIN4Q8IVV8 208 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ADGRG2Q8IZP9 1017 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 DEPDC4Q8N2C3 294 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ZNF579Q8NAF0 562 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 JDP2Q8WYK2 163 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 FAM149B1Q96BN6 582 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CCDC43Q96MW1 224 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 CAAP1Q9H8G2 361 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 STARD7Q9NQZ5 370 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 SEPT11Q9NVA2 429 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 INTS7Q9NVH2 962 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 STOML1Q9UBI4 398 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 MALT1Q9UDY8 824 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CLEC11AQ9Y240 323 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ZNF804BA4D1E1 1349 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 OR5K3A6NET4 321 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 F8W810 466 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 KRT86O43790 486 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 RNASEH1O60930 286 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 DTNBO60941 627 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 P4HA1P13674 534 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PHKA2P46019 1235 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 MASP1P48740 699 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CLCN4P51793 760 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 TNFAIP8L3Q5GJ75 292 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PPP6R3Q5H9R7 873 aaPredicted RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 TMEM63BQ5T3F8 832 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 OR7E24Q6IFN5 339 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 BTNL9Q6UXG8 535 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 AGMOQ6ZNB7 445 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 RBM44Q6ZP01 1051 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 FAM47EQ6ZV65 393 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CDH26Q8IXH8 852 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CENPSQ8N2Z9 138 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 FANK1Q8TC84 345 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CHPT1Q8WUD6 406 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PRPF31Q8WWY3 499 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 PSD2Q9BQI7 771 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.49□□□□□ -1.533e-7■■■□□ 18.5
HERC4-205ENST00000412272 THAP9Q9H5L6 903 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 TLE6Q9H808 572 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 GMEB2Q9UKD1 530 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 GRID1Q9ULK0 1009 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 UTP11Q9Y3A2 253 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 CLIC4Q9Y696 253 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 NWD2Q9ULI1 1742 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 GCOM1H8Y6P7 765 aaPredicted RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 TRAFD1O14545 582 aaPredicted RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 ZNF862O60290 1169 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 SIN3BO75182 1162 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 AFPP02771 609 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 CYP3A4P08684 503 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 MYZAPP0CAP1 466 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 SOX5P35711 763 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PPARGP37231 505 aaPredicted RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 SMAD4Q13485 552 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 SNAP47Q5SQN1 464 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 GRTP1Q5TC63 336 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 DUPD1Q68J44 220 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 PDE12Q6L8Q7 609 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 BORAQ6PGQ7 559 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 SHC4Q6S5L8 630 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 XKR5Q6UX68 686 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 LRRC47Q8N1G4 583 aaKnown RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 SEC14L1Q92503 715 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 INPP5DQ92835 1189 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 CMTM3Q96MX0 182 aa5.49□□□□□ -1.53
HERC4-205ENST00000412272 ZNF184Q99676 751 aaPredicted RBP5.49□□□□□ -1.53
HERC4-205ENST00000412272 DCLRE1BQ9H816 532 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms