RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 STRN3Q13033 797 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 KRTAP27-1Q3LI81 207 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 RNF219Q5W0B1 726 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 NECAB2Q7Z6G3 386 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 WDR66Q8TBY9 1149 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 TSPEARQ8WU66 669 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 HOXB13Q92826 284 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 USP7Q93009 1102 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 TTC1Q99614 292 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 PRSS22Q9GZN4 317 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 IFT22Q9H7X7 185 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 SMIM35A0A1B0GVV1 85 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 PRRT4C9JH25 899 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 GPR39O43194 453 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 SUN1O94901 812 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 RHOP08100 348 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 FAM163BP0C2L3 166 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 MTHFD2P13995 350 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 ZFXP17010 805 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 DDCP20711 480 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 SCP2P22307 547 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 SFPQP23246 707 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 EVA1CP58658 441 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 PPP3CAQ08209 521 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 MTM1Q13496 603 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 STAT4Q14765 748 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 HLXQ14774 488 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 TRIP6Q15654 476 aaKnown RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 MUM1Q2TAK8 710 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 BRDTQ58F21 947 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 UTP14CQ5TAP6 766 aaKnown RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 DLK2Q6UY11 383 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 NANOGP1Q8N7R0 232 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 FANCBQ8NB91 859 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 NSUN7Q8NE18 718 aaKnown RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 PRSS3P2Q8NHM4 247 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 ALG8Q9BVK2 526 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 QRSL1Q9H0R6 528 aaKnown RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 VSX1Q9NZR4 365 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 CTTNBP2NLQ9P2B4 639 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 SCOCQ9UIL1 159 aa3.24□□□□□ -1.89
HMGB3P2-201ENST00000411913 WASHC2CQ9Y4E1 1318 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 CCDC195A0A1B0GUA6 201 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 SOCS2O14508 198 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 NEMP1O14524 444 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 DNAJB5O75953 348 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 S100BP04271 92 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 NHLRC4P0CG21 123 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 NPTX2P47972 431 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 GUCY2FP51841 1108 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 MC2RQ01718 297 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 DACT2Q5SW24 774 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 MEPCEQ7L2J0 689 aaKnown RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 SLC29A4Q7RTT9 530 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 SPATS2Q86XZ4 545 aaKnown RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 ZBTB8BQ8NAP8 495 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 TGFBRAP1Q8WUH2 860 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 RFKQ969G6 155 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 FKBP10Q96AY3 582 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 CAMKK2Q96RR4 588 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 TPSD1Q9BZJ3 242 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 PUS7LQ9H0K6 701 aaKnown RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 C11orf54Q9H0W9 315 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 MANSC1Q9H8J5 431 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 SLC5A4Q9NY91 659 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 EHD3Q9NZN3 535 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 KLHL42Q9P2K6 505 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 APOBEC2Q9Y235 224 aaKnown RBP3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 AFG3L2Q9Y4W6 797 aa3.23□□□□□ -1.89
HMGB3P2-201ENST00000411913 MYBBP1AQ9BQG0 1328 aaKnown RBP3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 MARCH6O60337 910 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 AMY1AP04745 511 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 MCAMP43121 646 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 SLC6A9P48067 706 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 LINC00205P59089 165 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 PIGFQ07326 219 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 FAPQ12884 760 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 MALLQ13021 153 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 BMPR2Q13873 1038 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 FAM50AQ14320 339 aaKnown RBP3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 SEPT2Q15019 361 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 MIS18BP1Q6P0N0 1132 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 LHFPL2Q6ZUX7 228 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 ZNF551Q7Z340 670 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 GALNT16Q8N428 558 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 ZGPATQ8N5A5 531 aaKnown RBP3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 ACRBPQ8NEB7 543 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 SSH1Q8WYL5 1049 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 MARK4Q96L34 752 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 ORAI2Q96SN7 254 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 SERTAD4Q9NUC0 356 aa3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 TRNAU1APQ9NX07 287 aaKnown RBP3.22□□□□□ -1.89
HMGB3P2-201ENST00000411913 CYP2D7A0A087X1C5 515 aa3.21□□□□□ -1.9
HMGB3P2-201ENST00000411913 A0A0B4J269 797 aa3.21□□□□□ -1.9
HMGB3P2-201ENST00000411913 GOLGA8AA7E2F4 631 aa3.21□□□□□ -1.9
HMGB3P2-201ENST00000411913 FAM171A2A8MVW0 826 aa3.21□□□□□ -1.9
HMGB3P2-201ENST00000411913 F5H697 171 aa3.21□□□□□ -1.9
HMGB3P2-201ENST00000411913 MTHFD1P11586 935 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms