RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 TRIM5Q9C035 493 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 NIF3L1Q9GZT8 377 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 SIX2Q9NPC8 291 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 APEX2Q9UBZ4 518 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 YBX2Q9Y2T7 364 aaKnown RBP9.4□□□□□ -0.9
LINC02539-201ENST00000411615 CYB561D2O14569 222 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 SPTLC1O15269 473 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 AP5Z1O43299 807 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 HUS1O60921 280 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 ODC1P11926 461 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 FGFR3P22607 806 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 MFAP3P55082 362 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 YWHAEP62258 255 aaKnown RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 TNNC1P63316 161 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 MRPL58Q14197 206 aaKnown RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 KLHDC7AQ5VTJ3 777 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 SCARA3Q6AZY7 606 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 FUT10Q6P4F1 479 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 PDXDC1Q6P996 788 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 DSTYKQ6XUX3 929 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 NEK11Q8NG66 645 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 FAM84AQ96KN4 292 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 SENP8Q96LD8 212 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 CRACR2AQ9BSW2 395 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 PI4K2AQ9BTU6 479 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 C11orf84Q9BUA3 381 aaPredicted RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 SLC28A3Q9HAS3 691 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 APOBEC3GQ9HC16 384 aaKnown RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 CHST7Q9NS84 486 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 PUF60Q9UHX1 559 aaKnown RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 MYO6Q9UM54 1294 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 CNTN6Q9UQ52 1028 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 SSX2IPQ9Y2D8 614 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 PRG3Q9Y2Y8 225 aaPredicted RBP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC02539-201ENST00000411615 SNX9Q9Y5X1 595 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 CEP290O15078 2479 aa9.39□□□□□ -0.91
LINC02539-201ENST00000411615 NT5C1B-RDH14C9J2C7 533 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 H3BNC9 293 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 GABRDO14764 452 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 LRRN2O75325 713 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 FGF18O76093 207 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 NOL4O94818 638 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 OAZ2O95190 189 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 SOD2P04179 222 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 ITGB1P05556 798 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 MYOGP15173 224 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 UCHL3P15374 230 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 WARSP23381 471 aaKnown RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 DNAJB2P25686 324 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 CDC25BP30305 580 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 CTNNB1P35222 781 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 ASPAP45381 313 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 LHX1P48742 406 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 ZNF75DP51815 510 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 INCA1Q0VD86 236 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 CUL2Q13617 745 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 TRIM14Q14142 442 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 BMS1Q14692 1282 aaKnown RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 SOWAHAQ2M3V2 549 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 USP41Q3LFD5 358 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 SPECC1LQ69YQ0 1117 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 BLOC1S3Q6QNY0 202 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 UNC93AQ86WB7 457 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 TMEM173Q86WV6 379 aaPredicted RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 METTL23Q86XA0 190 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 FMNL3Q8IVF7 1028 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 PPM1KQ8N3J5 372 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 KLHL23Q8NBE8 558 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 BCL7CQ8WUZ0 217 aaPredicted RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 RABGGTAQ92696 567 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 TIFAQ96CG3 184 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 HERC2P3Q9BVR0 1158 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 LSM14BQ9BX40 385 aaKnown RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 NAA15Q9BXJ9 866 aaKnown RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 STK33Q9BYT3 514 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 GPR62Q9BZJ7 368 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 DNAI2Q9GZS0 605 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 LMAN2LQ9H0V9 348 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 GANQ9H2C0 597 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 IL21Q9HBE4 155 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 UBE2TQ9NPD8 197 aaPredicted RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 CEP72Q9P209 647 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 CACNG4Q9UBN1 327 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
LINC02539-201ENST00000411615 IRAK3Q9Y616 596 aa9.38□□□□□ -0.91
LINC02539-201ENST00000411615 A0A1W2PQJ5 194 aa9.37□□□□□ -0.91
LINC02539-201ENST00000411615 H7C4K7 107 aa9.37□□□□□ -0.91
LINC02539-201ENST00000411615 TBC1D4O60343 1298 aa9.37□□□□□ -0.91
LINC02539-201ENST00000411615 ARHGEF15O94989 841 aa9.37□□□□□ -0.91
LINC02539-201ENST00000411615 C1RP00736 705 aa9.37□□□□□ -0.91
LINC02539-201ENST00000411615 CTSAP10619 480 aa9.37□□□□□ -0.91
LINC02539-201ENST00000411615 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
LINC02539-201ENST00000411615 IGFBP6P24592 240 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms