RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 AHCYL1O43865 530 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 PHF2O75151 1096 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 GLULP15104 373 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 APEX1P27695 318 aaKnown RBP5.58□□□□□ -1.52
LSM5-205ENST00000409952 GABRB3P28472 473 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 PRDX5P30044 214 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 ECHS1P30084 290 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 MC3RP41968 323 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 STAT1P42224 750 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 LIMS1P48059 325 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 CARSP49589 748 aaKnown RBP5.58□□□□□ -1.52
LSM5-205ENST00000409952 SOX8P57073 446 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 SLC13A2Q13183 592 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 FAM26FQ5R3K3 315 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 CFAP58Q5T655 872 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 MFSD4BQ5TF39 518 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 KLHL17Q6TDP4 642 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 CCDC129Q6ZRS4 1044 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 TTLL10Q6ZVT0 673 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 MILR1Q7Z6M3 343 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 MICU3Q86XE3 530 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 FAM90A1Q86YD7 464 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 GATAD2AQ86YP4 633 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 LINC00482Q8N8I6 264 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 LINC01356Q8N9X3 169 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 ARRDC4Q8NCT1 418 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 CCDC150Q8NCX0 1101 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 ZNF384Q8TF68 577 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 HVCN1Q96D96 273 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 CYFIP2Q96F07 1278 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 LRRC46Q96FV0 321 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 PWWP2AQ96N64 755 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 AGXT2Q9BYV1 514 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 ZNF518BQ9C0D4 1074 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 BCAS3Q9H6U6 928 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 MLXIPQ9HAP2 919 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 SMURF2Q9HAU4 748 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 INCENPQ9NQS7 918 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 SRRDQ9UH36 339 aa5.58□□□□□ -1.52
LSM5-205ENST00000409952 SCAF8Q9UPN6 1271 aaKnown RBP5.58□□□□□ -1.52
LSM5-205ENST00000409952 MAGED1Q9Y5V3 778 aaPredicted RBP5.58□□□□□ -1.52
LSM5-205ENST00000409952 SH3D21A4FU49 640 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 HMX3A6NHT5 357 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 FFAR3O14843 346 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 TRIM13O60858 407 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 RTN3O95197 1032 aaPredicted RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 C8BP07358 591 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 HSP90AB1P08238 724 aaKnown RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 IDEP14735 1019 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 NPTX2P47972 431 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 CCR5P51681 352 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 CASP6P55212 293 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 ADAM9Q13443 819 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 MAN2A1Q16706 1144 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 MST1LQ2TV78 715 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 RRAGBQ5VZM2 374 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 HAUS3Q68CZ6 603 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 LRSAM1Q6UWE0 723 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 VGLL2Q8N8G2 317 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 AFG1LQ8WV93 481 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 IPCEF1Q8WWN9 437 aaPredicted RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 SNX27Q96L92 541 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 ZMAT2Q96NC0 199 aaKnown RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 PRPF18Q99633 342 aaKnown RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 HAPLN2Q9GZV7 340 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 RETREG1Q9H6L5 497 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 SEPSECSQ9HD40 501 aaKnown RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 KCND1Q9NSA2 647 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 HSPBP1Q9NZL4 362 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 NFKBIL1Q9UBC1 381 aaPredicted RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 ZNF212Q9UDV6 495 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 RGS17Q9UGC6 210 aaPredicted RBP5.57□□□□□ -1.52
LSM5-205ENST00000409952 ARHGAP26Q9UNA1 814 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 FRMD4BQ9Y2L6 1034 aa5.57□□□□□ -1.52
LSM5-205ENST00000409952 PI4KAP2A4QPH2 592 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 MBD3L4A6NDZ8 208 aaPredicted RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 MBD3L3A6NE82 208 aaPredicted RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 MAFO75444 373 aaPredicted RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 TMEM63AO94886 807 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 ABHD16AO95870 558 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 AHSGP02765 367 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 A1BGP04217 495 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 RARBP10826 455 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 IL1R1P14778 569 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 JUPP14923 745 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 AKR1B1P15121 316 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 ALOX12P18054 663 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 KLRC1P26715 233 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 ADSLP30566 484 aaPredicted RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 CHRNDQ07001 517 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 SLC12A1Q13621 1099 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 RAB32Q13637 225 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 PSMD6Q15008 389 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 ARHGAP15Q53QZ3 475 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 CD276Q5ZPR3 534 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 Q6ZVL8 140 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 CCDC117Q8IWD4 279 aaPredicted RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 FAM126BQ8IXS8 530 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms