RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 STIM1Q13586 685 aa33.49■■■□□ 2.95
TRAF3IP1-203ENST00000409739 C1orf220Q5T0J3 134 aa33.49■■■□□ 2.95
TRAF3IP1-203ENST00000409739 TOP6BLQ8N6T0 577 aa33.49■■■□□ 2.95
TRAF3IP1-203ENST00000409739 EEF2KMTQ96G04 330 aa33.49■■■□□ 2.95
TRAF3IP1-203ENST00000409739 WDR6Q9NNW5 1121 aaKnown RBP33.49■■■□□ 2.95
TRAF3IP1-203ENST00000409739 CLUHO75153 1309 aa33.49■■■□□ 2.95
TRAF3IP1-203ENST00000409739 PSMA7O14818 248 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 PSMC2P35998 433 aaKnown RBP33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 ANKRD40Q6AI12 368 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 INTS8Q75QN2 995 aaKnown RBP33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 THEM5Q8N1Q8 247 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 TMEM86AQ8N2M4 240 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 PGLYRP2Q96PD5 576 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 ZCWPW1Q9H0M4 648 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 MAFFQ9ULX9 164 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 NR2E1Q9Y466 385 aa33.48■■■□□ 2.95
TRAF3IP1-203ENST00000409739 C4BPAP04003 597 aaKnown RBP33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 CCNE1P24864 410 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 PPP1R2P41236 205 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 VAMP7P51809 220 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 LRRC63Q05C16 580 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 BIRC3Q13489 604 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 ZC3H3Q8IXZ2 948 aaKnown RBP33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 DHTKD1Q96HY7 919 aaPredicted RBP33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 MKNK1Q9BUB5 465 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 KIAA1468Q9P260 1216 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 INSL5Q9Y5Q6 135 aa33.47■■■□□ 2.95
TRAF3IP1-203ENST00000409739 PTPRDP23468 1912 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 C2CD4DB7Z1M9 353 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 CETN3O15182 167 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 PHACTR2O75167 634 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 XYLBO75191 536 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 MYL6P60660 151 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 TRPC3Q13507 836 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 SOWAHAQ2M3V2 549 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 LIMS2Q7Z4I7 341 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 ADGRF2Q8IZF7 708 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 SPATA18Q8TC71 538 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 KHSRPQ92945 711 aaKnown RBP eCLIP33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 XYLT2Q9H1B5 865 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 CLSTN2Q9H4D0 955 aa33.46■■■□□ 2.95
TRAF3IP1-203ENST00000409739 MTMR11A4FU01 709 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 PPP1R3GB7ZBB8 358 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 IKBKBO14920 756 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 TRIM49P0CI25 452 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 TRIM49CP0CI26 452 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 KRT13P13646 458 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 ENPEPQ07075 957 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 ZACNQ401N2 412 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 OSTM1Q86WC4 334 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 CRISPLD1Q9H336 500 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 DDX43Q9NXZ2 648 aaKnown RBP33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 POLIQ9UNA4 740 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 USTQ9Y2C2 406 aa33.45■■■□□ 2.95
TRAF3IP1-203ENST00000409739 VNN1O95497 513 aa33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 STAU1O95793 577 aaKnown RBP33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 LRG1P02750 347 aa33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 EPB41P11171 864 aaKnown RBP33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 SLC39A12Q504Y0 691 aa33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 DPH6Q7L8W6 267 aa33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 GRASPQ7Z6J2 395 aaPredicted RBP33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 RNF135Q8IUD6 432 aa33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 TRIML1Q8N9V2 468 aa33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 TDRD5Q8NAT2 981 aaKnown RBP33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 SYAP1Q96A49 352 aaPredicted RBP33.44■■■□□ 2.94
TRAF3IP1-203ENST00000409739 ATICP31939 592 aa33.43■■■□□ 2.94
TRAF3IP1-203ENST00000409739 FKBP3Q00688 224 aaKnown RBP33.43■■■□□ 2.94
TRAF3IP1-203ENST00000409739 NCOA4Q13772 614 aa33.43■■■□□ 2.94
TRAF3IP1-203ENST00000409739 KLHL10Q6JEL2 608 aa33.43■■■□□ 2.94
TRAF3IP1-203ENST00000409739 KBTBD7Q8WVZ9 684 aa33.43■■■□□ 2.94
TRAF3IP1-203ENST00000409739 HCFC1R1Q9NWW0 138 aa33.43■■■□□ 2.94
TRAF3IP1-203ENST00000409739 YIPF1Q9Y548 306 aa33.43■■■□□ 2.94
TRAF3IP1-203ENST00000409739 GABRDO14764 452 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 MCCD1P59942 119 aaPredicted RBP33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 NTHL1P78549 312 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 MYL7Q01449 175 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 DUSP4Q13115 394 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 SV2AQ7L0J3 742 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 LRRTM3Q86VH5 581 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 ATAD1Q8NBU5 361 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 VRTNQ9H8Y1 702 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 CTNND2Q9UQB3 1225 aa33.42■■■□□ 2.94
TRAF3IP1-203ENST00000409739 SLC16A3O15427 465 aaKnown RBP33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 HCRTO43612 131 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 N4BP1O75113 896 aaKnown RBP33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 LHX1P48742 406 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 PPP3CAQ08209 521 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 TWF1Q12792 350 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 WDR72Q3MJ13 1102 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 OTOP3Q7RTS5 596 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 TTC9BQ8N6N2 239 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 NELFBQ8WX92 580 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 MMS19Q96T76 1030 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 ACBD6Q9BR61 282 aa33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 DNMT3BQ9UBC3 853 aaKnown RBP33.41■■■□□ 2.94
TRAF3IP1-203ENST00000409739 TRIOO75962 3097 aa33.4■■■□□ 2.94
TRAF3IP1-203ENST00000409739 ACAT1P24752 427 aaKnown RBP33.4■■■□□ 2.94
TRAF3IP1-203ENST00000409739 TNNC1P63316 161 aa33.4■■■□□ 2.94
TRAF3IP1-203ENST00000409739 TSPY1Q01534 308 aa33.4■■■□□ 2.94
TRAF3IP1-203ENST00000409739 ZNF699Q32M78 642 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms