RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 MAGOHP61326 146 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 BTG3Q14201 252 aaPredicted RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 C6orf118Q5T5N4 469 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CCDC137Q6PK04 289 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 MED15Q96RN5 788 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 REXO4Q9GZR2 422 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 PSD3Q9NYI0 1048 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 SLC9A8Q9Y2E8 581 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CFAP74Q9C0B2 1584 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ADGBQ8N7X0 1667 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 HEATR9A2RTY3 570 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 WDR47O94967 919 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 YWHAQP27348 245 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ARRDC4Q8NCT1 418 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 TM6SF1Q9BZW5 370 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 UTP6Q9NYH9 597 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 CHURC1-FNTBB4DL54 471 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 CCR4P51679 360 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 HIRAP54198 1017 aaPredicted RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 SFSWAPQ12872 951 aaKnown RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 EMC2Q15006 297 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 PRAMEF19Q5SWL8 479 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 EPC1Q9H2F5 836 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 RRAGDQ9NQL2 400 aaPredicted RBP8.79□□□□□ -1
SCN9A-203ENST00000409672 FBXO28Q9NVF7 368 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 EFCAB6Q5THR3 1501 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 ZMYM4Q5VZL5 1548 aa8.79□□□□□ -1
SCN9A-203ENST00000409672 M0QYT0 321 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ARID5BQ14865 1188 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ZNF697Q5TEC3 545 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 MARK2Q7KZI7 788 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 UXS1Q8NBZ7 420 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 UCMAQ8WVF2 138 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CATSPERBQ9H7T0 1116 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 DDX56Q9NY93 547 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 UBP1Q9NZI7 540 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 DBR1Q9UK59 544 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 AKAP10O43572 662 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CCL23P55773 120 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 KRT39Q6A163 491 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 SCARA3Q6AZY7 606 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 KCNV1Q6PIU1 500 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 TFAP2DQ7Z6R9 452 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 RNF168Q8IYW5 571 aaPredicted RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 DEPDC7Q96QD5 511 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 THTPAQ9BU02 230 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 F8W810 466 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CYP19A1P11511 503 aaPredicted RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 LY6KQ17RY6 165 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 SETD3Q86TU7 594 aaPredicted RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 CDKL3Q8IVW4 592 aaPredicted RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 CLYBLQ8N0X4 340 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ATG4CQ96DT6 458 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 KRT84Q9NSB2 600 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 DPP3Q9NY33 737 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 TRPC4Q9UBN4 977 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CDC23Q9UJX2 597 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 VPS28Q9UK41 221 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CD4P01730 458 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 SKIP12755 728 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 NR1D1P20393 614 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ACO1P21399 889 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 DSG3P32926 999 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 USP6P35125 1406 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 OCA2Q04671 838 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 MRPL28Q13084 256 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 IZUMO3Q5VZ72 239 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 PDXDC1Q6P996 788 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 RHOT2Q8IXI1 618 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 AKT1S1Q96B36 256 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 NACC2Q96BF6 587 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 DNAJC1Q96KC8 554 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 EXOSC4Q9NPD3 245 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 MSRAQ9UJ68 235 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 F5H5T6 163 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 KRT33AO76009 404 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ALDH2P05091 517 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CDC27P30260 824 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 GTF2H1P32780 548 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 MLH1P40692 756 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ARHGAP17Q68EM7 881 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 PPP1R2P3Q6NXS1 205 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 GALNT4Q8N4A0 578 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 OMDQ99983 421 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ECT2Q9H8V3 914 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 NPHS2Q9NP85 383 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 STIP1P31948 543 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 SLC11A2P49281 568 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CLCN3P51790 818 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 PLD1Q13393 1074 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 TGS1Q96RS0 853 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 MAPRE1Q15691 268 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 ALS2CLQ60I27 953 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 DNAJB3Q8WWF6 145 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 DDX28Q9NUL7 540 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 CAND2O75155 1236 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CLK2P49760 499 aaKnown RBP8.78□□□□□ -1
SCN9A-203ENST00000409672 CSNK2BP67870 215 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 CCDC15Q0P6D6 951 aa8.78□□□□□ -1
SCN9A-203ENST00000409672 ACOT1Q86TX2 421 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms