RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 I3L4J1 428 aa21.89■■□□□ 1.09
VSX1-203ENST00000409285 SOD2P04179 222 aa21.89■■□□□ 1.09
VSX1-203ENST00000409285 KRT17Q04695 432 aa21.89■■□□□ 1.09
VSX1-203ENST00000409285 ARID5BQ14865 1188 aa21.89■■□□□ 1.09
VSX1-203ENST00000409285 CACNA2D4Q7Z3S7 1137 aa21.89■■□□□ 1.09
VSX1-203ENST00000409285 FMNL3Q8IVF7 1028 aa21.89■■□□□ 1.09
VSX1-203ENST00000409285 HERC2P3Q9BVR0 1158 aa21.89■■□□□ 1.09
VSX1-203ENST00000409285 BARX2Q9UMQ3 279 aaPredicted RBP21.89■■□□□ 1.09
VSX1-203ENST00000409285 SOX1O00570 391 aaPredicted RBP21.88■■□□□ 1.09
VSX1-203ENST00000409285 CILPO75339 1184 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 OAZ2O95190 189 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 WEE2P0C1S8 567 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 DNAJB2P25686 324 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 LHX1P48742 406 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 ZBED6P86452 979 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 UBE3AQ05086 875 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 RAPGEF1Q13905 1077 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 DRAP1Q14919 205 aaPredicted RBP21.88■■□□□ 1.09
VSX1-203ENST00000409285 USP41Q3LFD5 358 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 FAM171A1Q5VUB5 890 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 WSCD1Q658N2 575 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 UNC93AQ86WB7 457 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 KLHL23Q8NBE8 558 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 MRPL45Q9BRJ2 306 aaKnown RBP21.88■■□□□ 1.09
VSX1-203ENST00000409285 C17orf80Q9BSJ5 609 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 C11orf84Q9BUA3 381 aaPredicted RBP21.88■■□□□ 1.09
VSX1-203ENST00000409285 NUCKS1Q9H1E3 243 aaKnown RBP21.88■■□□□ 1.09
VSX1-203ENST00000409285 NLRC4Q9NPP4 1024 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 MTCL1Q9Y4B5 1905 aaKnown RBP21.88■■□□□ 1.09
VSX1-203ENST00000409285 MYO9BQ13459 2157 aa21.88■■□□□ 1.09
VSX1-203ENST00000409285 TPM1P09493 284 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 TKTP29401 623 aaKnown RBP21.87■■□□□ 1.09
VSX1-203ENST00000409285 RAP1GAPP47736 663 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 FXR1P51114 621 aaKnown RBP eCLIP21.87■■□□□ 1.09
VSX1-203ENST00000409285 ZNF132P52740 706 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 CDH8P55286 799 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 MRPL58Q14197 206 aaKnown RBP21.87■■□□□ 1.09
VSX1-203ENST00000409285 PPFIBP1Q86W92 1011 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 METTL23Q86XA0 190 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 FAM71AQ8IYT1 594 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 ZNF397Q8NF99 534 aaPredicted RBP21.87■■□□□ 1.09
VSX1-203ENST00000409285 PDLIM2Q96JY6 352 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 SPAG5Q96R06 1193 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 TTPALQ9BTX7 342 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 OXCT2Q9BYC2 517 aaPredicted RBP21.87■■□□□ 1.09
VSX1-203ENST00000409285 STXBP5LQ9Y2K9 1186 aa21.87■■□□□ 1.09
VSX1-203ENST00000409285 LUC7L2Q9Y383 392 aaKnown RBP21.87■■□□□ 1.09
VSX1-203ENST00000409285 PATJQ8NI35 1801 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 CASP14P31944 242 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 YWHAHQ04917 246 aaPredicted RBP21.86■■□□□ 1.09
VSX1-203ENST00000409285 ARHGAP44Q17R89 818 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 PPP2R2DQ66LE6 453 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 OVOS1Q6IE37 1185 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 PDXDC1Q6P996 788 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 CNGA4Q8IV77 575 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 SYN2Q92777 582 aaPredicted RBP21.86■■□□□ 1.09
VSX1-203ENST00000409285 SLC28A3Q9HAS3 691 aa21.86■■□□□ 1.09
VSX1-203ENST00000409285 RNF225M0QZC1 329 aaPredicted RBP21.85■■□□□ 1.09
VSX1-203ENST00000409285 FOXN3O00409 490 aaPredicted RBP21.85■■□□□ 1.09
VSX1-203ENST00000409285 MFAP3LO75121 409 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 SOX5P35711 763 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 DSG1Q02413 1049 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 RTP2Q5QGT7 225 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 VARS2Q5ST30 1063 aaKnown RBP21.85■■□□□ 1.09
VSX1-203ENST00000409285 WHAMMQ8TF30 809 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 PIK3R5Q8WYR1 880 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 LRCH3Q96II8 777 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 DNAJC7Q99615 494 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 ZBP1Q9H171 429 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 NKX2-4Q9H2Z4 354 aa21.85■■□□□ 1.09
VSX1-203ENST00000409285 LRRC53A6NM62 1247 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 CD58P19256 250 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 HNRNPH3P31942 346 aaKnown RBP21.84■■□□□ 1.09
VSX1-203ENST00000409285 GNL1P36915 607 aaPredicted RBP21.84■■□□□ 1.09
VSX1-203ENST00000409285 STAT1P42224 750 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 GLUD2P49448 558 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 ANKS3Q6ZW76 656 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 OSTM1Q86WC4 334 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 DRC7Q8IY82 874 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 ACBD6Q9BR61 282 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 NT5C1AQ9BXI3 368 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 DNAI2Q9GZS0 605 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 SNX25Q9H3E2 840 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 AIPL1Q9NZN9 384 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 PUF60Q9UHX1 559 aaKnown RBP21.84■■□□□ 1.09
VSX1-203ENST00000409285 NME7Q9Y5B8 376 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 TIMM13Q9Y5L4 95 aaPredicted RBP21.84■■□□□ 1.09
VSX1-203ENST00000409285 PLXNA3P51805 1871 aa21.84■■□□□ 1.09
VSX1-203ENST00000409285 H3BNC9 293 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 TBC1D4O60343 1298 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 PAEPP09466 180 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 PCSK1P29120 753 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 KRT9P35527 623 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 NDST1P52848 882 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 KIAA0319Q5VV43 1072 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 ZNF280DQ6N043 979 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 TMEM270Q6UE05 265 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 TAS1R1Q7RTX1 841 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 SPRED2Q7Z698 418 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 VPS52Q8N1B4 723 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms