RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 AXLP30530 894 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KRT6CP48668 564 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 HSPA13P48723 471 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 GTF2A2P52657 109 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 DEFA1P59665 94 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 DEFA3P59666 94 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CREMQ03060 361 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SLC9A4Q6AI14 798 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NCDNQ9UBB6 729 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 EIF3LQ9Y262 564 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 SIK3Q9Y2K2 1263 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NOX1Q9Y5S8 564 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CFAP73A6NFT4 308 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CDC40O60508 579 aaKnown RBP eCLIP3.53□□□□□ -1.84
NEB-204ENST00000409198 HLA-DQA2P01906 255 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RRM1P23921 792 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SFNP31947 248 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 GCLCP48506 637 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ITGA9Q13797 1035 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KCTD17Q8N5Z5 321 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 UHMK1Q8TAS1 419 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 GJD4Q96KN9 370 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 RMDN3Q96TC7 470 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 TUBGCP4Q9UGJ1 667 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 AURKCQ9UQB9 309 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CCL15-CCL14A0A0B4J2E2 113 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 E9PBE3 544 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ELAVL2Q12926 359 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 CCL15Q16663 113 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 TKFCQ3LXA3 575 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 TSHZ3Q63HK5 1081 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 BLZF1Q9H2G9 400 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 STK39Q9UEW8 545 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MYO1CO00159 1063 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RBP3P10745 1247 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 FGFR1P11362 822 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 TCEAL6Q6IPX3 200 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KCTD1Q719H9 257 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NRSN1Q8IZ57 195 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RTL3Q8N8U3 475 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 CASP10Q92851 521 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MTERF3Q96E29 417 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 IMPACTQ9P2X3 320 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 HEY1Q9Y5J3 304 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 C19orf81C9J6K1 198 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CKMP06732 381 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 H2AFXP16104 143 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 SULT1E1P49888 294 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 UGP2Q16851 508 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RSPH9Q9H1X1 276 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 DHX35Q9H5Z1 703 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 N6AMT1Q9Y5N5 214 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SMCO3A2RU48 225 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 GCATO75600 419 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ERCC1P07992 297 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ITGB6P18564 788 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NOS2P35228 1153 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MTTPP55157 894 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 COPZ1P61923 177 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KIAA1324Q6UXG2 1013 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 CATSPER1Q8NEC5 780 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 IL17RAQ96F46 866 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PPP1R16AQ96I34 528 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CINPQ9BW66 212 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ARL15Q9NXU5 204 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SAR1BQ9Y6B6 198 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 C2orf81A6NN90 581 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 F5H5T6 163 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 FANCCQ00597 558 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KLHL38Q2WGJ6 581 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 EFCAB3Q8N7B9 438 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RIN3Q8TB24 985 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PBKQ96KB5 322 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RGS18Q9NS28 235 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 GUCY1B2O75343 617 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PGM3O95394 542 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 GJA1P17302 382 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RPS6KB1P23443 525 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KRT24Q2M2I5 525 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 WDR36Q8NI36 951 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 MDM1Q8TC05 714 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SH3GL2Q99962 352 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 USP44Q9H0E7 712 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SLC39A2Q9NP94 309 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RNF146Q9NTX7 359 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 INTS9Q9NV88 658 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ALDH2P05091 517 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CTSHP09668 335 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 GNSP15586 552 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PBLDP30039 288 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 MAGEA10P43363 369 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 NCF4Q15080 339 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 AASDHQ4L235 1098 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 C10orf120Q5SQS8 335 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ZNF618Q5T7W0 954 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CMTR1Q8N1G2 835 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ASZ1Q8WWH4 475 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PSMB7Q99436 277 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SEPT3Q9UH03 358 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NDUFB9Q9Y6M9 179 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms