RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 UBTFL6P0CB48 400 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-203ENST00000409161 CDK8P49336 464 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 PDZK1Q5T2W1 519 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 CYP4Z2PQ8N1L4 340 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 PIGOQ8TEQ8 1089 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 ELMO2Q96JJ3 720 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 FAM210AQ96ND0 272 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 LATS2Q9NRM7 1088 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 TLR7Q9NYK1 1049 aaKnown RBP12.66□□□□□ -0.38
SHANK2-203ENST00000409161 KLHL3Q9UH77 587 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 ZNF211Q13398 564 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-203ENST00000409161 KRT77Q7Z794 578 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 NLGN1Q8N2Q7 840 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 FAM213AQ9BRX8 229 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 LRRC1Q9BTT6 524 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 ZNF302Q9NR11 478 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 PSTPIP1O43586 416 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 TNFAIP8O95379 198 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 BCL10O95999 233 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 TGFBR2P37173 567 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 ATP2C1P98194 919 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-203ENST00000409161 BTBD8Q5XKL5 378 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 ASZ1Q8WWH4 475 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 E2F7Q96AV8 911 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 AFF4Q9UHB7 1163 aaKnown RBP12.66□□□□□ -0.38
SHANK2-203ENST00000409161 TMCC3Q9ULS5 477 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 EMSYQ7Z589 1322 aa12.66□□□□□ -0.38
SHANK2-203ENST00000409161 JAK1P23458 1154 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 ACADSBP45954 432 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 USP39Q53GS9 565 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 POTEEQ6S8J3 1075 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SLC35G2Q8TBE7 412 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 WDR24Q96S15 920 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PCSK1NQ9UHG2 260 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 CITO14578 2027 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PDIA5Q14554 519 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 RCSD1Q6JBY9 416 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 CCNI2Q6ZMN8 369 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PPIL6Q8IXY8 311 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PREX2Q70Z35 1606 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SNPHO15079 494 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SOAT2O75908 522 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 NQO1P15559 274 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 RAD23AP54725 363 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 CCDC81Q6ZN84 652 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 ATXN7L3BQ96GX2 97 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 WHRNQ9P202 907 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 STARD13Q9Y3M8 1113 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 GMEB1Q9Y692 573 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SYNDIG1LA6NDD5 238 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 GRK2P25098 689 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 IRAK1P51617 712 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 DCTN2Q13561 401 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PPP1R36Q96LQ0 422 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 ERP44Q9BS26 406 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 MMADHCQ9H3L0 296 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 EIF3LQ9Y262 564 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 KLHL20Q9Y2M5 609 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 KLHL41O60662 606 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 NUDT2P50583 147 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 USP10Q14694 798 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PID1Q7Z2X4 250 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 CAAP1Q9H8G2 361 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SNUPNO95149 360 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 FDFT1P37268 417 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PRIM2P49643 509 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 TRIM25Q14258 630 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PHKG1Q16816 387 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 FAM180AQ6UWF9 173 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 OR8H2Q8N162 312 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 SNX31Q8N9S9 440 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 ZNF507Q8TCN5 953 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 BDH2Q9BUT1 245 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 ZFYVE1Q9HBF4 777 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 MOSPD1Q9UJG1 213 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PHF20L1A8MW92 1017 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PPP3CCP48454 512 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PSMC5P62195 406 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 PTGISQ16647 500 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-203ENST00000409161 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
SHANK2-203ENST00000409161 EFCAB6Q5THR3 1501 aa12.65□□□□□ -0.39
SHANK2-203ENST00000409161 POTECB2RU33 542 aa12.65□□□□□ -0.39
SHANK2-203ENST00000409161 HNRNPH1P31943 449 aaKnown RBP12.65□□□□□ -0.39
SHANK2-203ENST00000409161 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.65□□□□□ -0.39
SHANK2-203ENST00000409161 HMG20AQ9NP66 347 aa12.65□□□□□ -0.39
SHANK2-203ENST00000409161 PGK2P07205 417 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 GUCA1AP43080 201 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 UBXN2AP68543 259 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 POU4F1Q01851 419 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 NAB2Q15742 525 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 TBC1D10BQ4KMP7 808 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 RPAP3Q9H6T3 665 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms