RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ASB16Q96NS5 453 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 USP28Q96RU2 1077 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 FNBP1Q96RU3 617 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 KXD1Q9BQD3 176 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 FAM213AQ9BRX8 229 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 HCFC1R1Q9NWW0 138 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 PCDHB5Q9Y5E4 795 aa13.86□□□□□ -0.19
SNORD88B-201ENST00000408454 FRMD3A2A2Y4 597 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 KRBA1A5PL33 1030 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 PPP1R37O75864 691 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 LMNAP02545 664 aaKnown RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 NFICP08651 508 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 ME1P48163 572 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 AP3M2P53677 418 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 ASIC1P78348 528 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 DUSP4Q13115 394 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 DUOXA2Q1HG44 320 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 ZC2HC1CQ53FD0 456 aaPredicted RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 PRSS36Q5K4E3 855 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 CNNM4Q6P4Q7 775 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 RNF19BQ6ZMZ0 732 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 TPRG1Q6ZUI0 275 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 MFSD6LQ8IWD5 586 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 ZSCAN18Q8TBC5 510 aaPredicted RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 LEO1Q8WVC0 666 aaPredicted RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 ATRIPQ8WXE1 791 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 MRPS31Q92665 395 aaKnown RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 FUBP3Q96I24 572 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 DDX23Q9BUQ8 820 aaKnown RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 CXCL16Q9H2A7 254 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 SPATA6Q9NWH7 488 aaPredicted RBP13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 PCDHGA2Q9Y5H1 932 aa13.85□□□□□ -0.19
SNORD88B-201ENST00000408454 PVALEFA0A1B0GWK0 134 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 MTMR11A4FU01 709 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 MYMKA6NI61 221 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 FAM170BA6NMN3 283 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 CHADO15335 359 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 KRT19P08727 400 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 FAM163BP0C2L3 166 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 ZSCAN22P10073 491 aaPredicted RBP13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 CEBPBP17676 345 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 AVPR1AP37288 418 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 SPAG1Q07617 926 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 SLC39A12Q504Y0 691 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 SPECC1Q5M775 1068 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 FAM26FQ5R3K3 315 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 CC2D1AQ6P1N0 951 aaPredicted RBP13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 TOP6BLQ8N6T0 577 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 PDILTQ8N807 584 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 NOC3LQ8WTT2 800 aaKnown RBP13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 DNAJC19Q96DA6 116 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 FIZ1Q96SL8 496 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 SEPT5Q99719 369 aaPredicted RBP13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 ZCWPW1Q9H0M4 648 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 ATXN3LQ9H3M9 355 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 SMOC2Q9H3U7 446 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 LTB4R2Q9NPC1 389 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 KBTBD4Q9NVX7 518 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 RAB23Q9ULC3 237 aa13.84□□□□□ -0.19
SNORD88B-201ENST00000408454 ZDBF2Q9HCK1 2354 aa13.83□□□□□ -0.19
SNORD88B-201ENST00000408454 PRR23AA6NEV1 266 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 ANKRD63C9JTQ0 380 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 FOXD2O60548 495 aaPredicted RBP13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 PRPF6O94906 941 aaKnown RBP13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 SEC24AO95486 1093 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 P4HA1P13674 534 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 PFKLP17858 780 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 GDI1P31150 447 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 CCR3P51677 355 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 KPNA1P52294 538 aaPredicted RBP13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 GRIN1Q05586 938 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 BFSP1Q12934 665 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 PSMD2Q13200 908 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 FAM78AQ5JUQ0 283 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 DGKKQ5KSL6 1271 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 SLC39A4Q6P5W5 647 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 MAMSTRQ6ZN01 415 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 DNAJB7Q7Z6W7 309 aaPredicted RBP13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 WDR49Q8IV35 697 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 SYNPOQ8N3V7 929 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 PGLYRP2Q96PD5 576 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 STRA6Q9BX79 667 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 TRIM9Q9C026 710 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 TASP1Q9H6P5 420 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 GDAP2Q9NXN4 497 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 AGAP1Q9UPQ3 857 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 TIMM13Q9Y5L4 95 aaPredicted RBP13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
SNORD88B-201ENST00000408454 PDCD11Q14690 1871 aaKnown RBP13.82□□□□□ -0.2
SNORD88B-201ENST00000408454 VWA8A3KMH1 1905 aa13.82□□□□□ -0.2
SNORD88B-201ENST00000408454 ITGB3P05106 788 aa13.82□□□□□ -0.2
SNORD88B-201ENST00000408454 ANXA13P27216 316 aa13.82□□□□□ -0.2
SNORD88B-201ENST00000408454 GABRR2P28476 465 aa13.82□□□□□ -0.2
SNORD88B-201ENST00000408454 POLR2BP30876 1174 aaKnown RBP13.82□□□□□ -0.2
SNORD88B-201ENST00000408454 PPP3CCP48454 512 aa13.82□□□□□ -0.2
SNORD88B-201ENST00000408454 SLC5A9Q2M3M2 681 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms