RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ADCY8P40145 1251 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 MNAT1P51948 309 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 MOGSQ13724 837 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 MSS51Q4VC12 460 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 CDCA2Q69YH5 1023 aaPredicted RBP10.42□□□□□ -0.74
MSH2-202ENST00000406134 GRK7Q8WTQ7 553 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 FGD4Q96M96 766 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 CHUKO15111 745 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 MAGEB2O15479 319 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 THAP12O43422 761 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 VIMP08670 466 aaKnown RBP10.42□□□□□ -0.74
MSH2-202ENST00000406134 BRAFP15056 766 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 PECAM1P16284 738 aaPredicted RBP10.42□□□□□ -0.74
MSH2-202ENST00000406134 UBA1P22314 1058 aaKnown RBP10.42□□□□□ -0.74
MSH2-202ENST00000406134 EDNRBP24530 442 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 TRIM72Q6ZMU5 477 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 CYP4V2Q6ZWL3 525 aaPredicted RBP10.42□□□□□ -0.74
MSH2-202ENST00000406134 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 NIPA2Q8N8Q9 360 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 TAOK3Q9H2K8 898 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 TMEM134Q9H6X4 195 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 CYLDQ9NQC7 956 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 ACTL7BQ9Y614 415 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 CITO14578 2027 aa10.42□□□□□ -0.74
MSH2-202ENST00000406134 TYROBPO43914 113 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 HOXC6P09630 235 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 PROZP22891 400 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 MAGEA4P43358 317 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 NCOA4Q13772 614 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 ZNF268Q14587 947 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 SPOCD1Q6ZMY3 1216 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 TDRPQ86YL5 185 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 ANKS4BQ8N8V4 417 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 SLC35B2Q8TB61 432 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 PRCCQ92733 491 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 MAGEB18Q96M61 343 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 MCEEQ96PE7 176 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 RBM15Q96T37 977 aaKnown RBP eCLIP10.41□□□□□ -0.743e-8■■■■□ 21.3
MSH2-202ENST00000406134 MTMR12Q9C0I1 747 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 ANKFY1Q9P2R3 1169 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 CCNB1P14635 433 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 POLGP54098 1239 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 ADCY1Q08828 1119 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 EFTUD2Q15029 972 aaKnown RBP eCLIP10.41□□□□□ -0.743e-6■□□□□ 9.1
MSH2-202ENST00000406134 MTFR1Q15390 333 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 EAPPQ56P03 285 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 ANKRD22Q5VYY1 191 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 CCDC50Q8IVM0 306 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 BRSK2Q8IWQ3 736 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 AGGF1Q8N302 714 aaeCLIP10.41□□□□□ -0.74
MSH2-202ENST00000406134 GPATCH11Q8N954 259 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 ANKRD42Q8N9B4 389 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 DHRS4Q9BTZ2 278 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 MSTO1Q9BUK6 570 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 C10orf88Q9H8K7 445 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 PTPRHQ9HD43 1115 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 ZNF302Q9NR11 478 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 ARHGEF3Q9NR81 526 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 BRCA2P51587 3418 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 SOCS7O14512 581 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 STAM2O75886 525 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 GAS8O95995 478 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 KRT16P08779 473 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 GMPSP49915 693 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 BPIFB4P59827 614 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 MYL6P60660 151 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 SNCBQ16143 134 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 ACCSLQ4AC99 568 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 SRRM1Q8IYB3 904 aaKnown RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 MAIP1Q8WWC4 291 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 L3MBTL3Q96JM7 780 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 IFT74Q96LB3 600 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 STMN4Q9H169 189 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 UBN1Q9NPG3 1134 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 PARVAQ9NVD7 372 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 SAE1Q9UBE0 346 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 ZMYND8Q9ULU4 1186 aaPredicted RBP10.41□□□□□ -0.74
MSH2-202ENST00000406134 USTQ9Y2C2 406 aa10.41□□□□□ -0.74
MSH2-202ENST00000406134 TCRBV7S3A2A0A539 114 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 PRPF4O43172 522 aaKnown RBP eCLIP10.4□□□□□ -0.749e-10■■■□□ 17.2
MSH2-202ENST00000406134 ADCY3O60266 1144 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 CDH16O75309 829 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 SCN1AP35498 2009 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 ALDH5A1P51649 535 aaPredicted RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 ACVR2BQ13705 512 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 HP1BP3Q5SSJ5 553 aaPredicted RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 FAM182AQ5T1J6 154 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 CYP4A22Q5TCH4 519 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 NUGGCQ68CJ6 796 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 NKD2Q969F2 451 aaPredicted RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 TGS1Q96RS0 853 aaKnown RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 WRNIP1Q96S55 665 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 SDCBP2Q9H190 292 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 NOD2Q9HC29 1040 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 HOMER3Q9NSC5 361 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 GEMIN8Q9NWZ8 242 aaKnown RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 CPSF3Q9UKF6 684 aaKnown RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 PCDHGC3Q9UN70 934 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 SOWAHBA6NEL2 793 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms