RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 TULP2O00295 520 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 DAPK3O43293 454 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 TM4SF4P48230 202 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 SOX4Q06945 474 aaPredicted RBP14.95□□□□□ -0.02
PRAME-205ENST00000405655 CACNB2Q08289 660 aaPredicted RBP14.95□□□□□ -0.02
PRAME-205ENST00000405655 PTPN20Q4JDL3 420 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 ZNF677Q86XU0 584 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 PRELID2Q8N945 189 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 ATG4AQ8WYN0 398 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 MCEEQ96PE7 176 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 ADPGKQ9BRR6 497 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 GPBP1L1Q9HC44 474 aaPredicted RBP14.95□□□□□ -0.02
PRAME-205ENST00000405655 UVRAGQ9P2Y5 699 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 HPCAL4Q9UM19 191 aa14.95□□□□□ -0.02
PRAME-205ENST00000405655 F8VP50 259 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 CES2O00748 559 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 CYBAP13498 195 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 ECHS1P30084 290 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
PRAME-205ENST00000405655 GRM5P41594 1212 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 NDST1P52848 882 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 TNNC1P63316 161 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 POU5F1Q01860 360 aaKnown RBP14.94□□□□□ -0.02
PRAME-205ENST00000405655 PPARDQ03181 441 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 SNX1Q13596 522 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 UBXN11Q5T124 520 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 SLC27A1Q6PCB7 646 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 PHF13Q86YI8 300 aaPredicted RBP14.94□□□□□ -0.02
PRAME-205ENST00000405655 EMC1Q8N766 993 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 JOSD2Q8TAC2 188 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 C1orf54Q8WWF1 131 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 ZFP42Q96MM3 310 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 UBXN6Q9BZV1 441 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 CARD9Q9H257 536 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 PARP2Q9UGN5 583 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 PCDHA3Q9Y5H8 950 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 TLR3O15455 904 aaKnown RBP14.94□□□□□ -0.02
PRAME-205ENST00000405655 RARAP10276 462 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 AKR1A1P14550 325 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 MMP8P22894 467 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 TUBB4BP68371 445 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 ADCY2Q08462 1091 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 CCDC70Q6NSX1 233 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 PRUNE1Q86TP1 453 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 PIWIL1Q96J94 861 aaKnown RBP14.94□□□□□ -0.02
PRAME-205ENST00000405655 SNX27Q96L92 541 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 HEXIM2Q96MH2 286 aaKnown RBP14.94□□□□□ -0.02
PRAME-205ENST00000405655 RPS6KC1Q96S38 1066 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 CPXM1Q96SM3 734 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 TRIM6Q9C030 488 aaPredicted RBP14.94□□□□□ -0.02
PRAME-205ENST00000405655 DPEP3Q9H4B8 488 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 PTPN22Q9Y2R2 807 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 SNX9Q9Y5X1 595 aa14.94□□□□□ -0.02
PRAME-205ENST00000405655 PDCD11Q14690 1871 aaKnown RBP14.93□□□□□ -0.02
PRAME-205ENST00000405655 MYO1FO00160 1098 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 SPTLC1O15269 473 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 CILPO75339 1184 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 SREBF2Q12772 1141 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
PRAME-205ENST00000405655 UBL4BQ8N7F7 174 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 SOCS4Q8WXH5 440 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 LPPQ93052 612 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 CCDC102AQ96A19 550 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 FAM81BQ96LP2 452 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 ASB7Q9H672 318 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 FAM49BQ9NUQ9 324 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 R3HDM2Q9Y2K5 976 aaKnown RBP14.93□□□□□ -0.02
PRAME-205ENST00000405655 SCN10AQ9Y5Y9 1956 aa14.93□□□□□ -0.02
PRAME-205ENST00000405655 TMEM88BA6NKF7 163 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 AGPSO00116 658 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 MICAL2O94851 1124 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 ERBB2P04626 1255 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 UBAP2Q5T6F2 1119 aaKnown RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 PLEKHA7Q6IQ23 1121 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 ACOT1Q86TX2 421 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 FAM228AQ86W67 206 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 SMG8Q8ND04 991 aaKnown RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 LRRC4CQ9HCJ2 640 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 A0A0U1RQG5 324 aaPredicted RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 TCRBV5S1A1TA0A578 114 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 GGCXP38435 758 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 RGS7P49802 495 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 INHBEP58166 350 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 PTPN11Q06124 597 aaPredicted RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 NFX1Q12986 1120 aaKnown RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 HLTFQ14527 1009 aaKnown RBP eCLIP14.92□□□□□ -0.023e-8■■■■□ 23.8
PRAME-205ENST00000405655 NOTUMQ6P988 496 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
PRAME-205ENST00000405655 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
PRAME-205ENST00000405655 GRIN2DO15399 1336 aa14.91□□□□□ -0.02
PRAME-205ENST00000405655 M0QYV0 167 aa14.91□□□□□ -0.02
PRAME-205ENST00000405655 DUSP11O75319 330 aaKnown RBP14.91□□□□□ -0.02
PRAME-205ENST00000405655 GRAP2O75791 330 aa14.91□□□□□ -0.02
PRAME-205ENST00000405655 PROSCO94903 275 aa14.91□□□□□ -0.02
PRAME-205ENST00000405655 SYF2O95926 243 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms