RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
RPAIN-204ENST00000405578 ARHGEF37A1IGU5 675 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 PODXLO00592 558 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 CLSTN1O94985 981 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 TPM2P07951 284 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-204ENST00000405578 GTF2H1P32780 548 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 PNPLA4P41247 253 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 SLC11A1P49279 550 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 ZNF165P49910 485 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 RBP5P82980 135 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 CETN1Q12798 172 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 MYO1EQ12965 1108 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 BIRC3Q13489 604 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 TRPC3Q13507 836 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 UPP1Q16831 310 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 DCAF17Q5H9S7 520 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-204ENST00000405578 ZC3H14Q6PJT7 736 aaKnown RBP11.36□□□□□ -0.59
RPAIN-204ENST00000405578 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 MRPL43Q8N983 215 aaKnown RBP11.36□□□□□ -0.59
RPAIN-204ENST00000405578 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 ACSF2Q96CM8 615 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-204ENST00000405578 IGSF21Q96ID5 467 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 ZNF560Q96MR9 790 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 BPIFA3Q9BQP9 254 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-204ENST00000405578 DZANK1Q9NVP4 752 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 TUBGCP4Q9UGJ1 667 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 NFE2L3Q9Y4A8 694 aa11.36□□□□□ -0.59
RPAIN-204ENST00000405578 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.59
RPAIN-204ENST00000405578 LRRIQ3A6PVS8 624 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-204ENST00000405578 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 TMEM189-UBE2V1I3L0A0 370 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 MEFVO15553 781 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-204ENST00000405578 NARSO43776 548 aaKnown RBP11.35□□□□□ -0.59
RPAIN-204ENST00000405578 ITGB3P05106 788 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 CFHP08603 1231 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 KRT19P08727 400 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 EPCAMP16422 314 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 LRPAP1P30533 357 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 MTIF2P46199 727 aaKnown RBP11.35□□□□□ -0.59
RPAIN-204ENST00000405578 CLCNKBP51801 687 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 CLDN10P78369 228 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 NAB2Q15742 525 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 SV2CQ496J9 727 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 C9orf57Q5W0N0 161 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 TMC5Q6UXY8 1006 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 CCDC149Q6ZUS6 474 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 C11orf57Q6ZUT1 292 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-204ENST00000405578 TRAPPC11Q7Z392 1133 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 EFCAB13Q8IY85 973 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 IMPG2Q9BZV3 1241 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 CXCL16Q9H2A7 254 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 GOLGA2P5Q9HBQ8 144 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 ADAM28Q9UKQ2 775 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.35□□□□□ -0.59
RPAIN-204ENST00000405578 MYH11P35749 1972 aa11.35□□□□□ -0.59
RPAIN-204ENST00000405578 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 GOLGA6L19H0YKK7 550 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 N4BP1O75113 896 aaKnown RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 SP9P0CG40 484 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 CDK11BP21127 795 aaKnown RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 EEF1GP26641 437 aaKnown RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 POLR2BP30876 1174 aaKnown RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 TAF6P49848 677 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 MARSP56192 900 aaKnown RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 LMBRD2Q68DH5 695 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 KRT39Q6A163 491 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 OTOP3Q7RTS5 596 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 LRRC52Q8N7C0 313 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 C1orf127Q8N9H9 656 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 CNOT6LQ96LI5 555 aaKnown RBP11.34□□□□□ -0.59
RPAIN-204ENST00000405578 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 TBC1D17Q9HA65 648 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 KCNK12Q9HB15 430 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 CA14Q9ULX7 337 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 AGAP1Q9UPQ3 857 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
RPAIN-204ENST00000405578 ANO9A1A5B4 782 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 PIRO00625 290 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 B4GALT3O60512 393 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 KIF4AO95239 1232 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 CXCL14O95715 111 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 DCNP07585 359 aaKnown RBP11.33□□□□□ -0.6
RPAIN-204ENST00000405578 TRIM49P0CI25 452 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 TRIM49CP0CI26 452 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 P4HA1P13674 534 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 ATICP31939 592 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 GCLMP48507 274 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 MXI1P50539 228 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 GUCY2FP51841 1108 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 WNT7BP56706 349 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 NCOA4Q13772 614 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 USP41Q3LFD5 358 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 FUT10Q6P4F1 479 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms