RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SHDQ96IW2 340 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 ZSWIM3Q96MP5 696 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 LRRC3Q9BY71 257 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 LRRC27Q9C0I9 530 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 ZCWPW1Q9H0M4 648 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 TMEM206Q9H813 350 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 SIT1Q9Y3P8 196 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 NCANO14594 1321 aa16.59■□□□□ 0.25
TPM1-207ENST00000403994 DENND4CQ5VZ89 1909 aa16.58■□□□□ 0.25
TPM1-207ENST00000403994 F5P12259 2224 aa16.58■□□□□ 0.25
TPM1-207ENST00000403994 CACNA1IQ9P0X4 2223 aa16.58■□□□□ 0.25
TPM1-207ENST00000403994 KPNA7A9QM74 516 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 EXTL3O43909 919 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 LDHAP00338 332 aaKnown RBP16.58■□□□□ 0.24
TPM1-207ENST00000403994 ITGB3P05106 788 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 PDIA4P13667 645 aaKnown RBP16.58■□□□□ 0.24
TPM1-207ENST00000403994 GLULP15104 373 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 POLR2BP30876 1174 aaKnown RBP16.58■□□□□ 0.24
TPM1-207ENST00000403994 PNPLA4P41247 253 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 ALDH1A3P47895 512 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 EPHB3P54753 998 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 PRKCQQ04759 706 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 GRM2Q14416 872 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 TEAD2Q15562 447 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 WSCD1Q658N2 575 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 CNNM4Q6P4Q7 775 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 STXBP4Q6ZWJ1 553 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 FRMD5Q7Z6J6 570 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 METTL23Q86XA0 190 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 CXorf38Q8TB03 319 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
TPM1-207ENST00000403994 SMARCD2Q92925 531 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 BORCS6Q96GS4 357 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 SLITRK6Q9H5Y7 841 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 MAGEF1Q9HAY2 307 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 HSFX1Q9UBD0 423 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 SLC27A5Q9Y2P5 690 aa16.58■□□□□ 0.24
TPM1-207ENST00000403994 PTPRJQ12913 1337 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 A0A1W2PRU2 124 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 KANSL1LA0AUZ9 987 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 EIF3DO15371 548 aaKnown RBP eCLIP16.57■□□□□ 0.24
TPM1-207ENST00000403994 LRRN2O75325 713 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 HOXD13P35453 343 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 CDR1P51861 262 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 SLC44A4Q53GD3 710 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 VITQ6UXI7 678 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 TPRG1Q6ZUI0 275 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 EPM2AIP1Q7L775 607 aaPredicted RBP16.57■□□□□ 0.24
TPM1-207ENST00000403994 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 ZSCAN18Q8TBC5 510 aaPredicted RBP16.57■□□□□ 0.24
TPM1-207ENST00000403994 DNASE1L2Q92874 299 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 PSMG2Q969U7 264 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 SEPT5Q99719 369 aaPredicted RBP16.57■□□□□ 0.24
TPM1-207ENST00000403994 MTMR12Q9C0I1 747 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 TRPV4Q9HBA0 871 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 ZFP14Q9HCL3 533 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 PDE11AQ9HCR9 933 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 ZNF334Q9HCZ1 680 aaPredicted RBP16.57■□□□□ 0.24
TPM1-207ENST00000403994 ITGA11Q9UKX5 1188 aa16.57■□□□□ 0.24
TPM1-207ENST00000403994 UBE4BO95155 1302 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 PRR23AA6NEV1 266 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 TULP1O00294 542 aaPredicted RBP16.56■□□□□ 0.24
TPM1-207ENST00000403994 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
TPM1-207ENST00000403994 ATF6P18850 670 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 ME1P48163 572 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 AMPD3Q01432 767 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 UBXN2BQ14CS0 331 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 FAM26FQ5R3K3 315 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 STXBP5Q5T5C0 1151 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 RESP18Q5W5W9 173 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 LPIN3Q9BQK8 851 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 LTB4R2Q9NPC1 389 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 HEBP1Q9NRV9 189 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 SIX4Q9UIU6 781 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 L1RE1Q9UN81 338 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 AGAP1Q9UPQ3 857 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 ASB3Q9Y575 518 aa16.56■□□□□ 0.24
TPM1-207ENST00000403994 POLR2DO15514 142 aaKnown RBP16.55■□□□□ 0.24
TPM1-207ENST00000403994 TMEM191BP0C7N4 346 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 CD72P21854 359 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 CASP1P29466 404 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 VIPR2P41587 438 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 EHHADHQ08426 723 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 BFSP1Q12934 665 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 MGAT5BQ3V5L5 792 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 LMBRD2Q68DH5 695 aaPredicted RBP16.55■□□□□ 0.24
TPM1-207ENST00000403994 GAREM2Q75VX8 874 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 ASCL5Q7RTU5 278 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 LRRTM3Q86VH5 581 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 CBWD2Q8IUF1 395 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 THEM5Q8N1Q8 247 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 PDCL2Q8N4E4 241 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 C2orf15Q8WU43 125 aaKnown RBP16.55■□□□□ 0.24
TPM1-207ENST00000403994 CACTINQ8WUQ7 758 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms