RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 MTDHQ86UE4 582 aaKnown RBP12.65□□□□□ -0.38
RBM39-206ENST00000403542 ABRAQ8N0Z2 381 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 ZCCHC9Q8N567 271 aaKnown RBP12.65□□□□□ -0.38
RBM39-206ENST00000403542 GBP7Q8N8V2 638 aaPredicted RBP12.65□□□□□ -0.38
RBM39-206ENST00000403542 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 SPDL1Q96EA4 605 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 CFAP57Q96MR6 1250 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 PCSK1NQ9UHG2 260 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 AGTPBP1Q9UPW5 1226 aa12.65□□□□□ -0.38
RBM39-206ENST00000403542 CYP1A1P04798 512 aaPredicted RBP12.64□□□□□ -0.39
RBM39-206ENST00000403542 PDHA1P08559 390 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 NEFHP12036 1026 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
RBM39-206ENST00000403542 MAN1A1P33908 653 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 ZNF252P-AS1Q0IIN9 211 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 ZACNQ401N2 412 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 LONP2Q86WA8 852 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 EMC1Q8N766 993 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 MAIP1Q8WWC4 291 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 ZNF606Q8WXB4 792 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 FBXL18Q96ME1 805 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 ST6GALNAC4Q9H4F1 302 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 JAK3P52333 1124 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 KRT76Q01546 638 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 FSTL1Q12841 308 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 SPARCL1Q14515 664 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 TAF11Q15544 211 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 BBS9Q3SYG4 887 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 RHPN2Q8IUC4 686 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 FEZF2Q8TBJ5 459 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 ASAP3Q8TDY4 903 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 SLITRK1Q96PX8 696 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 SENP7Q9BQF6 1050 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 AVENQ9NQS1 362 aaPredicted RBP12.64□□□□□ -0.39
RBM39-206ENST00000403542 CYP26B1Q9NR63 512 aa12.64□□□□□ -0.39
RBM39-206ENST00000403542 K7ERI5 159 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 RGS20O76081 388 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 C4BPAP04003 597 aaKnown RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 CD48P09326 243 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 CAV1Q03135 178 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 RIPK1Q13546 671 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 SMAD1Q15797 465 aaKnown RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 MAPK6Q16659 721 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 PLEKHG4Q58EX7 1191 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 CRELD2Q6UXH1 353 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 PRR11Q96HE9 360 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 MRPL47Q9HD33 250 aaKnown RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 SLC17A7Q9P2U7 560 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 WNT10BO00744 389 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 DNALI1O14645 258 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 MAPK13O15264 365 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 EXTL3O43909 919 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 LYPLA2O95372 231 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 CCND1P24385 295 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 GCLCP48506 637 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 RAD23BP54727 409 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 NCOA4Q13772 614 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 FNBP1LQ5T0N5 605 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 EEPD1Q7L9B9 569 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 OTOAQ7RTW8 1153 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 KATNAL2Q8IYT4 538 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 EXD1Q8NHP7 514 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 RFWD2Q8NHY2 731 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 TBC1D10AQ9BXI6 508 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 MTMR12Q9C0I1 747 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 ANKEF1Q9NU02 776 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 LGALS13Q9UHV8 139 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 COL11A2P13942 1736 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 CFAP69A5D8W1 941 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 PSTPIP1O43586 416 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 ZBED4O75132 1171 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 CD19P15391 556 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 ACTR2P61160 394 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 FKBP1AP62942 108 aaKnown RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 PRKG1Q13976 671 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 TAF5Q15542 800 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 C3orf62Q6ZUJ4 267 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 SYDE1Q6ZW31 735 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 DEPTORQ8TB45 409 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 FAM81BQ96LP2 452 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 NUDCD1Q96RS6 583 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 PLCD4Q9BRC7 762 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 JPH1Q9HDC5 661 aaPredicted RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 METTL5Q9NRN9 209 aaKnown RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 PARVAQ9NVD7 372 aa12.63□□□□□ -0.39
RBM39-206ENST00000403542 NXF1Q9UBU9 619 aaKnown RBP12.63□□□□□ -0.39
RBM39-206ENST00000403542 TJP3O95049 919 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms