RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 C1orf131Q8NDD1 294 aaKnown RBP27.27■■□□□ 1.96
CPNE1-205ENST00000401607 BTBD6Q96KE9 485 aa27.27■■□□□ 1.96
CPNE1-205ENST00000401607 RNF14Q9UBS8 474 aa27.27■■□□□ 1.96
CPNE1-205ENST00000401607 SNX9Q9Y5X1 595 aa27.27■■□□□ 1.96
CPNE1-205ENST00000401607 DDX3YO15523 660 aaKnown RBP27.26■■□□□ 1.95
CPNE1-205ENST00000401607 CYP3A5P20815 502 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 C1QBPQ07021 282 aaKnown RBP27.26■■□□□ 1.95
CPNE1-205ENST00000401607 MESDQ14696 234 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 ZNF618Q5T7W0 954 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 CCDC181Q5TID7 509 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 ZFP42Q96MM3 310 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 TRPV6Q9H1D0 765 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 GOLGA2P5Q9HBQ8 144 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 STARD7Q9NQZ5 370 aa27.26■■□□□ 1.95
CPNE1-205ENST00000401607 TMEM110-MUSTN1A8MSY1 372 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 MGEA5O60502 916 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 MMP8P22894 467 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 NDST1P52848 882 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 ITIH3Q06033 890 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 C2orf54Q08AI8 447 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 PAK2Q13177 524 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 DSC3Q14574 896 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 DENND1BQ6P3S1 775 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 PHLDB2Q86SQ0 1253 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 TTC39CQ8N584 583 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 TMEM35BQ8NCS4 154 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 PBKQ96KB5 322 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 PPP1R10Q96QC0 940 aaKnown RBP27.25■■□□□ 1.95
CPNE1-205ENST00000401607 ZNF518BQ9C0D4 1074 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 PAFAH1B1P43034 410 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 RBM10P98175 930 aaKnown RBP27.25■■□□□ 1.95
CPNE1-205ENST00000401607 CFAP221Q4G0U5 840 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 SPATA4Q8NEY3 305 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 MRPL45Q9BRJ2 306 aaKnown RBP27.25■■□□□ 1.95
CPNE1-205ENST00000401607 ANKZF1Q9H8Y5 726 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 PHF24Q9UPV7 400 aa27.25■■□□□ 1.95
CPNE1-205ENST00000401607 MED7O43513 233 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 CAND2O75155 1236 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 ITGA4P13612 1032 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 LIN9Q5TKA1 542 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 GSTCDQ8NEC7 633 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 RPS6KC1Q96S38 1066 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 LHX5Q9H2C1 402 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 DNAH12Q6ZR08 3092 aa27.24■■□□□ 1.95
CPNE1-205ENST00000401607 A0A0U1RQG5 324 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-205ENST00000401607 SPTLC1O15269 473 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 ATF7P17544 494 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-205ENST00000401607 COMTP21964 271 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 PLEKHA7Q6IQ23 1121 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 TRAF7Q6Q0C0 670 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 MRPL10Q7Z7H8 261 aaKnown RBP27.23■■□□□ 1.95
CPNE1-205ENST00000401607 CPNE8Q86YQ8 564 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 HACE1Q8IYU2 909 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 LPPQ93052 612 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 TRAIPQ9BWF2 469 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 UNC93B1Q9H1C4 597 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 ANAPC7Q9UJX3 599 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 NME7Q9Y5B8 376 aa27.23■■□□□ 1.95
CPNE1-205ENST00000401607 VDRP11473 427 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 CKBP12277 381 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 H2AFXP16104 143 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-205ENST00000401607 MLH1P40692 756 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 FBXO38Q6PIJ6 1188 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 MSANTD4Q8NCY6 345 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 ZNF560Q96MR9 790 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 TRIM7Q9C029 511 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 SQORQ9Y6N5 450 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 LRPAP1P30533 357 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 DCAF12L1Q5VU92 463 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 AGMOQ6ZNB7 445 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 GAD1Q99259 594 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 NT5C1AQ9BXI3 368 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.22■■□□□ 1.952e-6■■■■■ 55.4
CPNE1-205ENST00000401607 CEP83Q9Y592 693 aa27.22■■□□□ 1.95
CPNE1-205ENST00000401607 O00370 1275 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 PNPLA4P41247 253 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 AFF1P51825 1210 aaKnown RBP27.21■■□□□ 1.95
CPNE1-205ENST00000401607 MAMLD1Q13495 774 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 SOWAHAQ2M3V2 549 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 CD101Q93033 1021 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 HEXIM2Q96MH2 286 aaKnown RBP27.21■■□□□ 1.95
CPNE1-205ENST00000401607 PARD6BQ9BYG5 372 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 GDAP2Q9NXN4 497 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 CYTH4Q9UIA0 394 aa27.21■■□□□ 1.95
CPNE1-205ENST00000401607 KPNA7A9QM74 516 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 KBTBD13C9JR72 458 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 ARVCFO00192 962 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 CEP104O60308 925 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 ZNF623O75123 536 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 MICAL2O94851 1124 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 CALB1P05937 261 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 RHOXF2BP0C7M4 288 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 TAF6P49848 677 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 RASGEF1CQ8N431 466 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 MMGT1Q8N4V1 131 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 USP38Q8NB14 1042 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 ACTRT1Q8TDG2 376 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 RHOXF2Q9BQY4 288 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 MIOSQ9NXC5 875 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 PTPN22Q9Y2R2 807 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms