RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 FKBP15Q5T1M5 1219 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 KIAA1841Q6NSI8 718 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 MRPL43Q8N983 215 aaKnown RBP17.07■□□□□ 0.32
HMGA1-204ENST00000401473 XPO4Q9C0E2 1151 aaKnown RBP17.07■□□□□ 0.32
HMGA1-204ENST00000401473 NIF3L1Q9GZT8 377 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 TSC2P49815 1807 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 FSCN2O14926 492 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 EPHB6O15197 1021 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 TACC1O75410 805 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 NOL4O94818 638 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 RPL17P18621 184 aaKnown RBP17.07■□□□□ 0.32
HMGA1-204ENST00000401473 GLUD2P49448 558 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 PLCB2Q00722 1185 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 FILIP1LQ4L180 1135 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 OVOS1Q6IE37 1185 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 OSTM1Q86WC4 334 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 PPM1KQ8N3J5 372 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 MICAL1Q8TDZ2 1067 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 PIK3R5Q8WYR1 880 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 KREMEN1Q96MU8 473 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 NT5C1BQ96P26 610 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 MRPL17Q9NRX2 175 aaKnown RBP17.07■□□□□ 0.32
HMGA1-204ENST00000401473 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 AJAP1Q9UKB5 411 aaPredicted RBP17.07■□□□□ 0.32
HMGA1-204ENST00000401473 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 MTCH2Q9Y6C9 303 aa17.07■□□□□ 0.32
HMGA1-204ENST00000401473 COL4A4P53420 1690 aaPredicted RBP17.07■□□□□ 0.32
HMGA1-204ENST00000401473 ADAM12O43184 909 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 CUL2Q13617 745 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 PLPP4Q5VZY2 271 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 ADGRF2Q8IZF7 708 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 MRPL38Q96DV4 380 aaKnown RBP17.06■□□□□ 0.32
HMGA1-204ENST00000401473 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 TMEM209Q96SK2 561 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 UBE2TQ9NPD8 197 aaPredicted RBP17.06■□□□□ 0.32
HMGA1-204ENST00000401473 ENTPD7Q9NQZ7 604 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 APEX2Q9UBZ4 518 aa17.06■□□□□ 0.32
HMGA1-204ENST00000401473 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 URODP06132 367 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 CNPP09543 421 aaKnown RBP17.05■□□□□ 0.32
HMGA1-204ENST00000401473 POU3F3P20264 500 aaPredicted RBP17.05■□□□□ 0.32
HMGA1-204ENST00000401473 IGFBP4P22692 258 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 PBX1P40424 430 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 CDR1P51861 262 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 ANKS3Q6ZW76 656 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 TMEM86AQ8N2M4 240 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 LSM14BQ9BX40 385 aaKnown RBP17.05■□□□□ 0.32
HMGA1-204ENST00000401473 NGRNQ9NPE2 291 aaKnown RBP17.05■□□□□ 0.32
HMGA1-204ENST00000401473 FAM207AQ9NSI2 230 aaPredicted RBP17.05■□□□□ 0.32
HMGA1-204ENST00000401473 DSEQ9UL01 958 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 PDGFRBP09619 1106 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 P4HA1P13674 534 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 GNL1P36915 607 aaPredicted RBP17.05■□□□□ 0.32
HMGA1-204ENST00000401473 GCNT1Q02742 428 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 OR10T2Q8NGX3 314 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 WHAMMQ8TF30 809 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 PLCB1Q9NQ66 1216 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 CISHQ9NSE2 258 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 DDX43Q9NXZ2 648 aaKnown RBP17.05■□□□□ 0.32
HMGA1-204ENST00000401473 HMGXB4Q9UGU5 601 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 STXBP5LQ9Y2K9 1186 aa17.05■□□□□ 0.32
HMGA1-204ENST00000401473 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.04■□□□□ 0.32
HMGA1-204ENST00000401473 TEX28O15482 410 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 ATP2C2O75185 946 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 UCHL3P15374 230 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 CD58P19256 250 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 ACO1P21399 889 aaKnown RBP17.04■□□□□ 0.32
HMGA1-204ENST00000401473 WARSP23381 471 aaKnown RBP17.04■□□□□ 0.32
HMGA1-204ENST00000401473 ACAT1P24752 427 aaKnown RBP17.04■□□□□ 0.32
HMGA1-204ENST00000401473 PSMD5Q16401 504 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 CTXN3Q4LDR2 81 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 SARM1Q6SZW1 724 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 ADGRD2Q7Z7M1 963 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 LRRTM3Q86VH5 581 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 GLYCTKQ8IVS8 523 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 GPR65Q8IYL9 337 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 OR6B3Q8NGW1 331 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 TWNKQ96RR1 684 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 LPIN3Q9BQK8 851 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 NAA15Q9BXJ9 866 aaKnown RBP17.04■□□□□ 0.32
HMGA1-204ENST00000401473 LMAN2LQ9H0V9 348 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 GANQ9H2C0 597 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 CYP3A43Q9HB55 503 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 VCANP13611 3396 aa17.04■□□□□ 0.32
HMGA1-204ENST00000401473 RNF225M0QZC1 329 aaPredicted RBP17.03■□□□□ 0.32
HMGA1-204ENST00000401473 PER2O15055 1255 aa17.03■□□□□ 0.32
HMGA1-204ENST00000401473 OR4Q2P0C623 313 aa17.03■□□□□ 0.32
HMGA1-204ENST00000401473 OR1D2P34982 312 aa17.03■□□□□ 0.32
HMGA1-204ENST00000401473 CA8P35219 290 aa17.03■□□□□ 0.32
HMGA1-204ENST00000401473 LHX1P48742 406 aa17.03■□□□□ 0.32
HMGA1-204ENST00000401473 NDST1P52848 882 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms