RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 DLG3Q92796 817 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 SEC16BQ96JE7 1060 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 FAR2Q96K12 515 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 RBM7Q9Y580 266 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 GGPS1O95749 300 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CHRNB3Q05901 458 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 IFNEQ86WN2 208 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ARHGEF16Q5VV41 709 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 RFX8Q6ZV50 586 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 STK32CQ86UX6 486 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 MEMO1Q9Y316 297 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 FGRP09769 529 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 SCGB2A2Q13296 93 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ZYG11AQ6WRX3 759 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ZNF654Q8IZM8 581 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 POP5Q969H6 163 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TMA16Q96EY4 203 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 GSTM1P09488 218 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CUEDC1Q9NWM3 386 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 C3orf20Q8ND61 904 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ATXN3LQ9H3M9 355 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 MTMR10Q9NXD2 777 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 NOVA2Q9UNW9 492 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 BCLAF3A2AJT9 711 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 HAT1O14929 419 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 NUAK1O60285 661 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 GPBP1Q86WP2 473 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 SLC13A5Q86YT5 568 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 SUGP1Q8IWZ8 645 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CMTR2Q8IYT2 770 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 FAM133AQ8N9E0 248 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TRPV1Q8NER1 839 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 RDM1Q8NG50 284 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ZSCAN18Q8TBC5 510 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 BHMT2Q9H2M3 363 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TPRKBQ9Y3C4 175 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 SSH2Q76I76 1423 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 RGSL1A5PLK6 1076 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 HNRNPDLO14979 420 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ALOX15P16050 662 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 NR4A1P22736 598 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 PTX3P26022 381 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CHRNA5P30532 468 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CYP24A1Q07973 514 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TRIP10Q15642 601 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TCHHL1Q5QJ38 904 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CXXC5Q7LFL8 322 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 BFARQ9NZS9 450 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 MAGEA12P43365 314 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CTCFP49711 727 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 RPS6P62753 249 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 LONRF3Q496Y0 759 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ALKBH5Q6P6C2 394 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CASC3O15234 703 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 SCGB2A1O75556 95 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TOGARAM2Q6ZUX3 1019 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 MAPKAPK5Q8IW41 473 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 RORBQ92753 470 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 ZNF215Q9UL58 517 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 MYH15Q9Y2K3 1946 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 VCLP18206 1134 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TMPOP42166 694 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 PGDP52209 483 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 UGT3A1Q6NUS8 523 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 TPH2Q8IWU9 490 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 MYL10Q9BUA6 226 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 CKLFQ9UBR5 152 aa8.93□□□□□ -0.98
CACNA1C-220ENST00000399655 PI4K2BG5E9Z4 385 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 IFNA16P05015 189 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 SOAT1P35610 550 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 CHI3L1P36222 383 aaPredicted RBP8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 TNFAIP1Q13829 316 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 PEX5LQ8IYB4 626 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 MIEF2Q96C03 454 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 VPS11Q9H270 941 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 FAM172BPA6NC97 362 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 H3BUI4 141 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 TFDP2Q14188 446 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 EMC2Q15006 297 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 PABPC1LQ4VXU2 614 aaKnown RBP8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 TRAPPC9Q96Q05 1148 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 ZC3H12CQ9C0D7 883 aaKnown RBP8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 TMEM206Q9H813 350 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 SAYSD1Q9NPB0 183 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 DLGAP2Q9P1A6 1054 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 ZFATQ9P243 1243 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 FARSAQ9Y285 508 aaKnown RBP8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 DPYSL4O14531 572 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 TSPAN1O60635 241 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 LBPP18428 481 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 PSMA2P25787 234 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 SLCO1A2P46721 670 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 DRG2P55039 364 aaKnown RBP8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 KCNT1Q5JUK3 1230 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 KBTBD7Q8WVZ9 684 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 ETAA1Q9NY74 926 aa8.92□□□□□ -0.98
CACNA1C-220ENST00000399655 GCNT4Q9P109 453 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms