RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 CYP7B1O75881 506 aa13.04□□□□□ -0.32
CACNA1C-209ENST00000399603 SDC4P31431 198 aa13.04□□□□□ -0.32
CACNA1C-209ENST00000399603 GPC5P78333 572 aa13.04□□□□□ -0.32
CACNA1C-209ENST00000399603 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-209ENST00000399603 PIF1Q9H611 641 aa13.04□□□□□ -0.32
CACNA1C-209ENST00000399603 HDAC6Q9UBN7 1215 aa13.04□□□□□ -0.32
CACNA1C-209ENST00000399603 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
CACNA1C-209ENST00000399603 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 ATP6V1B2P21281 511 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 NME5P56597 212 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 LONRF1Q17RB8 773 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 PPP1R14BQ96C90 147 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 RPS6KB2Q9UBS0 482 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 KLHL3Q9UH77 587 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 DIS3Q9Y2L1 958 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 ANKARQ7Z5J8 1434 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 SKAP2O75563 359 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 MYL2P10916 166 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 CCDC130P13994 396 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 PDHA2P29803 388 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 PGM3O95394 542 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 SLC13A5Q86YT5 568 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 SH2D3CQ8N5H7 860 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 ZNF564Q8TBZ8 553 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 TRIM51Q9BSJ1 452 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 ADI1Q9BV57 179 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 NDUFS3O75489 264 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 NUDT2P50583 147 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 TSHZ1Q6ZSZ6 1077 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 SCFD2Q8WU76 684 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 DCPSQ96C86 337 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 MAGEA13PA6NCF6 341 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 MAP3K13O43283 966 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 TCEA3O75764 348 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 PCSK7Q16549 785 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 CATSPER4Q7RTX7 472 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 ZCCHC7Q8N3Z6 543 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 DCUN1D5Q9BTE7 237 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 KRCC1Q9NPI7 259 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 DDX18Q9NVP1 670 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
CACNA1C-209ENST00000399603 KCNN4O15554 427 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 RAD17O75943 681 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 PSMA4P25789 261 aaKnown RBP13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 EFHC2Q5JST6 749 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 SDE2Q6IQ49 451 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 TRPC4APQ8TEL6 797 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 SEMA3EO15041 775 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 TFE3P19532 575 aaPredicted RBP13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 CCND2P30279 289 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 SCRN3Q0VDG4 424 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 SNX30Q5VWJ9 437 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 EFHBQ8N7U6 833 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 TAF1DQ9H5J8 278 aaPredicted RBP13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 MYL3P08590 195 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 PLA2G4BP0C869 781 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 LCP1P13796 627 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 MTM1Q13496 603 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 GAL3ST3Q96A11 431 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 BHMT2Q9H2M3 363 aa13.02□□□□□ -0.32
CACNA1C-209ENST00000399603 IGF2BP3O00425 579 aaKnown RBP eCLIP13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 PTPN7P35236 360 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 MAGEA10P43363 369 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 C12orf60Q5U649 245 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 GALNT17Q6IS24 598 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 TMEM138Q9NPI0 162 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 SNX13Q9Y5W8 968 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 HUS1O60921 280 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 VHLP40337 213 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 CYP51A1Q16850 503 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 PTPRN2Q92932 1015 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 MNTQ99583 582 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 DDX50Q9BQ39 737 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 TSEN34Q9BSV6 310 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 HMGB3O15347 200 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 GSTA3Q16772 222 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 PHKG1Q16816 387 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 CDC73Q6P1J9 531 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 PMM1Q92871 262 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 ZNF222Q9UK12 451 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 PCDHGA4Q9Y5G9 962 aa13.02□□□□□ -0.33
CACNA1C-209ENST00000399603 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
CACNA1C-209ENST00000399603 TRIM49D1C9J1S8 452 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms