RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 KCNA3P22001 575 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 MTM1Q13496 603 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 FOXB2Q5VYV0 432 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 RINLQ6ZS11 566 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.052e-13■□□□□ 9.1
APOB-202ENST00000399256 SCYL3Q8IZE3 742 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 WDR60Q8WVS4 1066 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 MCUR1Q96AQ8 359 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 AVENQ9NQS1 362 aaPredicted RBP14.76□□□□□ -0.05
APOB-202ENST00000399256 PI4KBQ9UBF8 816 aa14.76□□□□□ -0.05
APOB-202ENST00000399256 C2orf71A6NGG8 1288 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 LIASO43766 372 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 TBX10O75333 385 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 PSMG1O95456 288 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 GH2P01242 217 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 CFHP08603 1231 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 NPR1P16066 1061 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 CRKP46108 304 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 RBM5P52756 815 aaKnown RBP eCLIP14.75□□□□□ -0.052e-9■■□□□ 11.4
APOB-202ENST00000399256 ALCAMQ13740 583 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 CEP128Q6ZU80 1094 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 VPS52Q8N1B4 723 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 PTCD3Q96EY7 689 aaKnown RBP14.75□□□□□ -0.05
APOB-202ENST00000399256 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 TRIM4Q9C037 500 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 SLC17A7Q9P2U7 560 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 SUGT1Q9Y2Z0 365 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 PSTPIP1O43586 416 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 ERFP50548 548 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 SLC34A1Q06495 639 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 APLFQ8IW19 511 aaPredicted RBP14.75□□□□□ -0.05
APOB-202ENST00000399256 POMGNT1Q8WZA1 660 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 ZHX2Q9Y6X8 837 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 PMM2O15305 246 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 ZBED4O75132 1171 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 TCF4P15884 667 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 SERPINB3P29508 390 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 RARRES1P49788 294 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 CACNA2D1P54289 1103 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 GTF2BQ00403 316 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 GAD2Q05329 585 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 ZBTB16Q05516 673 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 SPDYAQ5MJ70 313 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 SV2AQ7L0J3 742 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 LRRC6Q86X45 466 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 KATNAL2Q8IYT4 538 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.75□□□□□ -0.05
APOB-202ENST00000399256 TCP10LQ8TDR4 215 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 PTPRN2Q92932 1015 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 FAM81BQ96LP2 452 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 ZC3H12CQ9C0D7 883 aaKnown RBP14.75□□□□□ -0.05
APOB-202ENST00000399256 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.75□□□□□ -0.051e-23■□□□□ 9.2
APOB-202ENST00000399256 FAM198AQ9UFP1 575 aa14.75□□□□□ -0.05
APOB-202ENST00000399256 SMAPO00193 183 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 PPEF1O14829 653 aaPredicted RBP14.74□□□□□ -0.05
APOB-202ENST00000399256 ZWINTO95229 277 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 IFNB1P01574 187 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 GCLCP48506 637 aaPredicted RBP14.74□□□□□ -0.05
APOB-202ENST00000399256 HHIPL2Q6UWX4 724 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 B3GNT9Q6UX72 402 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 TAB3Q8N5C8 712 aaPredicted RBP14.74□□□□□ -0.05
APOB-202ENST00000399256 STMN2Q93045 179 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 NSL1Q96IY1 281 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 COQ4Q9Y3A0 265 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 WASF2Q9Y6W5 498 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 HNRNPCL1O60812 293 aaKnown RBP14.74□□□□□ -0.05
APOB-202ENST00000399256 SSTR1P30872 391 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 STAT2P52630 851 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 GPX6P59796 221 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 PTP4A2Q12974 167 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 NFX1Q12986 1120 aaKnown RBP14.74□□□□□ -0.05
APOB-202ENST00000399256 TFDP1Q14186 410 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 ACSF2Q96CM8 615 aaPredicted RBP14.74□□□□□ -0.05
APOB-202ENST00000399256 IFT43Q96FT9 208 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 FGD4Q96M96 766 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 SIPA1L1O43166 1804 aa14.74□□□□□ -0.05
APOB-202ENST00000399256 VIL1P09327 827 aaKnown RBP14.73□□□□□ -0.05
APOB-202ENST00000399256 MAPTP10636 758 aaKnown RBP14.73□□□□□ -0.05
APOB-202ENST00000399256 ECE1P42892 770 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 RPS6KA3P51812 740 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 ARFIP2P53365 341 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 OCRLQ01968 901 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 FAM102BQ5T8I3 360 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 LMBRD2Q68DH5 695 aaPredicted RBP14.73□□□□□ -0.05
APOB-202ENST00000399256 TATDN1Q6P1N9 297 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 CENPUQ71F23 418 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 MON1BQ7L1V2 547 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 EXD1Q8NHP7 514 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 MASTLQ96GX5 879 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 TRIM55Q9BYV6 548 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 MANSC1Q9H8J5 431 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 ALOX15BO15296 676 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 UBTFL6P0CB48 400 aaPredicted RBP14.73□□□□□ -0.05
APOB-202ENST00000399256 DSG3P32926 999 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 CPA2P48052 419 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 GEMIN4P57678 1058 aaKnown RBP14.73□□□□□ -0.05
APOB-202ENST00000399256 LMNB2Q03252 620 aa14.73□□□□□ -0.05
APOB-202ENST00000399256 THOC5Q13769 683 aaKnown RBP14.73□□□□□ -0.05
APOB-202ENST00000399256 EAPPQ56P03 285 aaPredicted RBP14.73□□□□□ -0.05
APOB-202ENST00000399256 TTC7BQ86TV6 843 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms