RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.9
COL13A1-205ENST00000398978 CAV1Q03135 178 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 EXD1Q8NHP7 514 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 ERP27Q96DN0 273 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 TRIM11Q96F44 468 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 SENP7Q9BQF6 1050 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 MRPL47Q9HD33 250 aaKnown RBP20.64■□□□□ 0.89
COL13A1-205ENST00000398978 BPIFB4P59827 614 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 PDIA2Q13087 525 aaKnown RBP20.64■□□□□ 0.89
COL13A1-205ENST00000398978 NCOA4Q13772 614 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 STAT4Q14765 748 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 MTFR1Q15390 333 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 SLC1A5Q15758 541 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 ZNF449Q6P9G9 518 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 NIM1KQ8IY84 436 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 ZCCHC9Q8N567 271 aaKnown RBP20.64■□□□□ 0.89
COL13A1-205ENST00000398978 RXFP1Q9HBX9 757 aa20.64■□□□□ 0.89
COL13A1-205ENST00000398978 CFAP73A6NFT4 308 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 FGFR1P11362 822 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 CLNS1AP54105 237 aaKnown RBP20.63■□□□□ 0.89
COL13A1-205ENST00000398978 HIRAP54198 1017 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-205ENST00000398978 OSTNP61366 133 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 TRABD2AQ86V40 505 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 TCHPQ9BT92 498 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 EURLQ9NYK6 297 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 LGALS13Q9UHV8 139 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 DNALI1O14645 258 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-205ENST00000398978 DIAPH2O60879 1101 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 ZC3H11AO75152 810 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL13A1-205ENST00000398978 DPEP1P16444 411 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 ZNF268Q14587 947 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-205ENST00000398978 WDR72Q3MJ13 1102 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 ZNF677Q86XU0 584 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 LBHD1Q9BQE6 289 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-205ENST00000398978 MTMR12Q9C0I1 747 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 HAO1Q9UJM8 370 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 KAT6AQ92794 2004 aa20.63■□□□□ 0.89
COL13A1-205ENST00000398978 ITGBL1O95965 494 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-205ENST00000398978 CA4P22748 312 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 SSTR1P30872 391 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 GDF10P55107 478 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 IL9RQ01113 521 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 ABHD15Q6UXT9 468 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 PARVAQ9NVD7 372 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 ZNRF3Q9ULT6 936 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 PHTF1Q9UMS5 762 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 POTEJP0CG39 1038 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 MSH2P43246 934 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 NAA25Q14CX7 972 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 ANKRD22Q5VYY1 191 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 ANKRD35Q8N283 1001 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 MYL6P60660 151 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 GHRHRQ02643 423 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 SPOCD1Q6ZMY3 1216 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 GPRASP2Q96D09 838 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 CEP83Q9Y592 693 aa20.62■□□□□ 0.89
COL13A1-205ENST00000398978 ASMTLO95671 621 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 PRKG1Q13976 671 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 TMEM132BQ14DG7 1078 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 DNAJC24Q6P3W2 148 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 EEPD1Q7L9B9 569 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 VSIG1Q86XK7 387 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 NSUN6Q8TEA1 469 aaKnown RBP20.61■□□□□ 0.89
COL13A1-205ENST00000398978 MAK16Q9BXY0 300 aaKnown RBP20.61■□□□□ 0.89
COL13A1-205ENST00000398978 C17orf75Q9HAS0 396 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 CNTN2Q02246 1040 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 MSS51Q4VC12 460 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 GPAT2Q6NUI2 795 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL13A1-205ENST00000398978 PHF13Q86YI8 300 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-205ENST00000398978 UTP4Q969X6 686 aaKnown RBP20.61■□□□□ 0.89
COL13A1-205ENST00000398978 CFAP57Q96MR6 1250 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 CHKBQ9Y259 395 aa20.61■□□□□ 0.89
COL13A1-205ENST00000398978 TMEM191CA6NGB0 347 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 TCEA3O75764 348 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 TMEM191BP0C7N4 346 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 MCCD1P59942 119 aaPredicted RBP20.6■□□□□ 0.89
COL13A1-205ENST00000398978 OVGP1Q12889 678 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 FKBP1CQ5VVH2 108 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 PPP1R21Q6ZMI0 780 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 MAGEC3Q8TD91 643 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 TFAP2BQ92481 460 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 ARHGEF3Q9NR81 526 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 IP6K2Q9UHH9 426 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 SKAP2O75563 359 aaPredicted RBP20.6■□□□□ 0.89
COL13A1-205ENST00000398978 CBX6O95503 412 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 MMP8P22894 467 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 ALLCQ8N6M5 410 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 EMC1Q8N766 993 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 SCINQ9Y6U3 715 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 CNTNAP2Q9UHC6 1331 aa20.6■□□□□ 0.89
COL13A1-205ENST00000398978 CD48P09326 243 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 RAP1GAPP47736 663 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 CLDN10P78369 228 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 TFDP1Q14186 410 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 TLDC1Q6P9B6 456 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 BBOF1Q8ND07 529 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 FER1L6Q2WGJ9 1857 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 TCRBV7S3A2A0A539 114 aa20.59■□□□□ 0.89
COL13A1-205ENST00000398978 TJP3O95049 919 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms