RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 RIPK2O43353 540 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 OATP04181 439 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 LINGO3P0C6S8 592 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 CREB1P16220 341 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 ANXA13P27216 316 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 SSR1P43307 286 aaKnown RBP11.98□□□□□ -0.49
RCC1-204ENST00000398958 VPS41P49754 854 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 DRG2P55039 364 aaKnown RBP11.98□□□□□ -0.49
RCC1-204ENST00000398958 BEX3Q00994 111 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 TDRD10Q5VZ19 366 aaKnown RBP11.98□□□□□ -0.49
RCC1-204ENST00000398958 CST9Q5W186 159 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 USP50Q70EL3 339 aaPredicted RBP11.98□□□□□ -0.49
RCC1-204ENST00000398958 SPATA21Q7Z572 469 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 RIOX2Q8IUF8 465 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 GDAP1Q8TB36 358 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 C1orf54Q8WWF1 131 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 ATG4AQ8WYN0 398 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 FNBP1Q96RU3 617 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 APOL6Q9BWW8 343 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 HEMGNQ9BXL5 484 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 ZFATQ9P243 1243 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 USTQ9Y2C2 406 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 EVPLQ92817 2033 aa11.98□□□□□ -0.49
RCC1-204ENST00000398958 TMEM120BA0PK00 339 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 CLDN3O15551 220 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 GRIN3BO60391 1043 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 DGAT1O75907 488 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 KRT19P08727 400 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 OSBPP22059 807 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 LONRF1Q17RB8 773 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 SHC3Q92529 594 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 KIFAP3Q92845 792 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
RCC1-204ENST00000398958 MINDY3Q9H8M7 445 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 AGO2Q9UKV8 859 aaKnown RBP11.97□□□□□ -0.49
RCC1-204ENST00000398958 AKT3Q9Y243 479 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 SZT2Q5T011 3432 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 DOCK1Q14185 1865 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 SOCS7O14512 581 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 ADCY6O43306 1168 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 HLA-DRAP01903 254 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 PTGIRP43119 386 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 GHRHRQ02643 423 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 TMEM270Q6UE05 265 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
RCC1-204ENST00000398958 ARHGEF2Q92974 986 aaKnown RBP11.97□□□□□ -0.49
RCC1-204ENST00000398958 TMEM109Q9BVC6 243 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 RXFP1Q9HBX9 757 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 ANAPC7Q9UJX3 599 aa11.97□□□□□ -0.49
RCC1-204ENST00000398958 MYH9P35579 1960 aaKnown RBP11.97□□□□□ -0.49
RCC1-204ENST00000398958 A6NHS1 94 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 DYNC1LI2O43237 492 aaPredicted RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 PHF2O75151 1096 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 RRM1P23921 792 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 ZNF200P98182 395 aaPredicted RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 STRN3Q13033 797 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 ALCAMQ13740 583 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 RBBP5Q15291 538 aaKnown RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 NOL9Q5SY16 702 aaKnown RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 ASRGL1Q7L266 308 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 CHST13Q8NET6 341 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 ACSF2Q96CM8 615 aaPredicted RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 RMDN2Q96LZ7 410 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 C11orf70Q9BRQ4 267 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 HERPUD2Q9BSE4 406 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 MSTO1Q9BUK6 570 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 ETNK1Q9HBU6 452 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 APOBEC3GQ9HC16 384 aaKnown RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 PARP2Q9UGN5 583 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 HES2Q9Y543 173 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 FOXO6A8MYZ6 492 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 AP1G2O75843 785 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 TFAMQ00059 246 aaKnown RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 CAPSQ13938 189 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 TNFAIP8L3Q5GJ75 292 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 C12orf56Q8IXR9 622 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 PRELID2Q8N945 189 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 SLC17A8Q8NDX2 589 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 GPRC5AQ8NFJ5 357 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 DDX1Q92499 740 aaKnown RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 MFSD14AQ96MC6 490 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 PWWP2AQ96N64 755 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 PLCD4Q9BRC7 762 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 CXCL16Q9H2A7 254 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 PDLIM7Q9NR12 457 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 RBAKQ9NYW8 714 aaPredicted RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 ABT1Q9ULW3 272 aaKnown RBP11.96□□□□□ -0.49
RCC1-204ENST00000398958 PPP2R3BQ9Y5P8 575 aa11.96□□□□□ -0.49
RCC1-204ENST00000398958 ATP8B3O60423 1300 aa11.96□□□□□ -0.5
RCC1-204ENST00000398958 RLFQ13129 1914 aa11.96□□□□□ -0.5
RCC1-204ENST00000398958 KLHL33A6NCF5 533 aa11.95□□□□□ -0.5
RCC1-204ENST00000398958 SNUPNO95149 360 aaKnown RBP11.95□□□□□ -0.5
RCC1-204ENST00000398958 VNN1O95497 513 aa11.95□□□□□ -0.5
RCC1-204ENST00000398958 CST3P01034 146 aaPredicted RBP11.95□□□□□ -0.5
RCC1-204ENST00000398958 IQCF3P0C7M6 154 aa11.95□□□□□ -0.5
RCC1-204ENST00000398958 RARGP13631 454 aa11.95□□□□□ -0.5
RCC1-204ENST00000398958 XKR3Q5GH77 459 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms