RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 HDLBPQ00341 1268 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 PACS1Q6VY07 963 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 ZMAT2Q96NC0 199 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 MTG1Q9BT17 334 aaPredicted RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 NT5C1AQ9BXI3 368 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 TUBE1Q9UJT0 475 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 ZNF711Q9Y462 761 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 AP3B1O00203 1094 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 POMCP01189 267 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 MMP1P03956 469 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 GPC5P78333 572 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 ERO1BQ86YB8 467 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 TNS4Q8IZW8 715 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 S100A13Q99584 98 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 UBE2OQ9C0C9 1292 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 YY1AP1Q9H869 796 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 SNTNA6NMZ2 147 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 MAN1A2O60476 641 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 ZNF286BP0CG31 522 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 ABCE1P61221 599 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 OCA2Q04671 838 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 FAM133BQ5BKY9 247 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 XKR3Q5GH77 459 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 FAM124AQ86V42 546 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 USP44Q9H0E7 712 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 SPG21Q9NZD8 308 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 WDR47O94967 919 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 SLC2A3P11169 496 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 POLR2EP19388 210 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 HOXC12P31275 282 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 PSEN2P49810 448 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 TAF6P49848 677 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 CARD9Q9H257 536 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 VTNP04004 478 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 EIF3EP60228 445 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 ZMYM1Q5SVZ6 1142 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 ZNF280DQ6N043 979 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 CHST13Q8NET6 341 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 CAPS2Q9BXY5 557 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 HAUS4Q9H6D7 363 aa11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
SLC38A1-201ENST00000398637 CBX4O00257 560 aa11.9□□□□□ -0.51
SLC38A1-201ENST00000398637 KPNA3O00505 521 aaPredicted RBP11.9□□□□□ -0.51
SLC38A1-201ENST00000398637 IL18RAPO95256 599 aa11.9□□□□□ -0.51
SLC38A1-201ENST00000398637 RASGRP1O95267 797 aa11.9□□□□□ -0.51
SLC38A1-201ENST00000398637 THP07101 528 aa11.9□□□□□ -0.51
SLC38A1-201ENST00000398637 FAM171A1Q5VUB5 890 aa11.9□□□□□ -0.51
SLC38A1-201ENST00000398637 TUBGCP3Q96CW5 907 aa11.9□□□□□ -0.51
SLC38A1-201ENST00000398637 APRTP07741 180 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 EIF4A3P38919 411 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 POU4F1Q01851 419 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 UAP1L1Q3KQV9 507 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 ALS2CLQ60I27 953 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 NANOGNBQ7Z5D8 188 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 CCDC197Q8NCU1 140 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 ZNF564Q8TBZ8 553 aaPredicted RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 RNPC3Q96LT9 517 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 ZMYND12Q9H0C1 365 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 ARMC7Q9H6L4 198 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 SMPD4Q9NXE4 827 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 PCDHA13Q9Y5I0 950 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 MSH4O15457 936 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 TSPAN3O60637 253 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 IYDQ6PHW0 289 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 NLRP9Q7RTR0 991 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 FBXO16Q8IX29 292 aaPredicted RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 SRBD1Q8N5C6 995 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 KDM5AP29375 1690 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 KPNA6O60684 536 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 NOS3P29474 1203 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 MAP3K7CLP57077 242 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 SRSF11Q05519 484 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 TRPC4Q9UBN4 977 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 TRMT6Q9UJA5 497 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 PCDHB11Q9Y5F2 797 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 VPS4BO75351 444 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 OR6A2O95222 327 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 CLEC16AQ2KHT3 1053 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 ADNPQ9H2P0 1102 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 NHEJ1Q9H9Q4 299 aaPredicted RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 MRPL17Q9NRX2 175 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 VPS51Q9UID3 782 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 MRPS23Q9Y3D9 190 aaKnown RBP11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 E2F8A0AVK6 867 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 ADCY3O60266 1144 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 RHOCP08134 193 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 EMC2Q15006 297 aa11.89□□□□□ -0.51
SLC38A1-201ENST00000398637 UBA3Q8TBC4 463 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms