RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 C9orf50Q5SZB4 431 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 PPP1R2P3Q6NXS1 205 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 C8orf74Q6P047 294 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 FAM212AQ96EL1 285 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 LRRC1Q9BTT6 524 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 FUT8Q9BYC5 575 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 CHST12Q9NRB3 414 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 CXXC1Q9P0U4 656 aaPredicted RBP19.55■□□□□ 0.72
MBD1-208ENST00000398493 L1RE1Q9UN81 338 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 FAM189A1O60320 539 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 CLTAP09496 248 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 IKBKEQ14164 716 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 KYAT1Q16773 422 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 C11orf63Q6NUN7 778 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 OR5B17Q8NGF7 314 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 DDX1Q92499 740 aaKnown RBP19.54■□□□□ 0.72
MBD1-208ENST00000398493 TRIM11Q96F44 468 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 TSPYL2Q9H2G4 693 aaPredicted RBP19.54■□□□□ 0.72
MBD1-208ENST00000398493 RGS18Q9NS28 235 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 RBM12Q9NTZ6 932 aaKnown RBP19.54■□□□□ 0.72
MBD1-208ENST00000398493 EHD2Q9NZN4 543 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 UVRAGQ9P2Y5 699 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 GTF3C4Q9UKN8 822 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 PCDHB4Q9Y5E5 795 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 PTPRJQ12913 1337 aa19.54■□□□□ 0.72
MBD1-208ENST00000398493 MIF4GDA9UHW6 222 aaKnown RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 PGRMC1O00264 195 aaKnown RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 MTA2O94776 668 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 IL18RAPO95256 599 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 TNNC2P02585 160 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 IBSPP21815 317 aaPredicted RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 AXLP30530 894 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 TNFSF9P41273 254 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 NOP14P78316 857 aaKnown RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 TRPC3Q13507 836 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 CLEC16AQ2KHT3 1053 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 SGSM1Q2NKQ1 1148 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 TWF2Q6IBS0 349 aaKnown RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 NOTUMQ6P988 496 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 CCNI2Q6ZMN8 369 aaPredicted RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 TMCO2Q7Z6W1 182 aaPredicted RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 ANKRD36BP1Q96IX9 119 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 FTHL17Q9BXU8 183 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 ACBD3Q9H3P7 528 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 GOLPH3Q9H4A6 298 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 RPF1Q9H9Y2 349 aaKnown RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 SMARCAL1Q9NZC9 954 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 CYP1A2P05177 515 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 TMEM191BP0C7N4 346 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 POU5F1Q01860 360 aaKnown RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 TRIM72Q6ZMU5 477 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 THNSL1Q8IYQ7 743 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 UBL4BQ8N7F7 174 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 RPS6KC1Q96S38 1066 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 NAP1L3Q99457 506 aaPredicted RBP19.53■□□□□ 0.72
MBD1-208ENST00000398493 HES2Q9Y543 173 aa19.53■□□□□ 0.72
MBD1-208ENST00000398493 C9IYK1 514 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 MAP2K7O14733 419 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 NPTXRO95502 500 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 MYBL1P10243 752 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 DEFB103AP81534 67 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 SPOPLQ6IQ16 392 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 SLC27A1Q6PCB7 646 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 PSRC1Q6PGN9 363 aaPredicted RBP19.52■□□□□ 0.72
MBD1-208ENST00000398493 RASGEF1CQ8N431 466 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 CEP120Q8N960 986 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 SMG8Q8ND04 991 aaKnown RBP19.52■□□□□ 0.72
MBD1-208ENST00000398493 ZNF653Q96CK0 615 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 CDT1Q9H211 546 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 ACP6Q9NPH0 428 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 STIM2Q9P246 746 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 ALG6Q9Y672 507 aa19.52■□□□□ 0.72
MBD1-208ENST00000398493 ABHD14A-ACY1A0A1B0GW23 586 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 MEIS3P2A8K0S8 358 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 CCDC188H7C350 402 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 MCF2P10911 925 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 RNASE9P60153 205 aaKnown RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 WDR5P61964 334 aaKnown RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 DMTNQ08495 405 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 SHHQ15465 462 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 ELMO3Q96BJ8 720 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 FAM84AQ96KN4 292 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 APOBEC3GQ9HC16 384 aaKnown RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 FAM105AQ9NUU6 356 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 TTC7AQ9ULT0 858 aaPredicted RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 COG5Q9UP83 839 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 CNTN6Q9UQ52 1028 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 A0A0U1RQF3 1178 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 ASS1P00966 412 aaKnown RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 ATF7P17544 494 aaPredicted RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 ACO1P21399 889 aaKnown RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 FAM189BP81408 668 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 TFAMQ00059 246 aaKnown RBP19.51■□□□□ 0.71
MBD1-208ENST00000398493 TMEM270Q6UE05 265 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 SLC24A5Q71RS6 500 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 IFT20Q8IY31 132 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 CRIPAKQ8N1N5 446 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 HERVK_113Q902F9 699 aa19.51■□□□□ 0.71
MBD1-208ENST00000398493 TRAIPQ9BWF2 469 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms