RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 GMEB2Q9UKD1 530 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 ODF2LQ9ULJ1 636 aa13.06□□□□□ -0.32
TFF3-202ENST00000398431 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
TFF3-202ENST00000398431 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
TFF3-202ENST00000398431 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
TFF3-202ENST00000398431 CYP11A1P05108 521 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 RETP07949 1114 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 NFICP08651 508 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 GABRR2P28476 465 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 CTHP32929 405 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 CDR1P51861 262 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 GTF2BQ00403 316 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 GRIN1Q05586 938 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 GPR158Q5T848 1215 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 RALGPS2Q86X27 583 aaPredicted RBP13.05□□□□□ -0.32
TFF3-202ENST00000398431 CD302Q8IX05 232 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 YAF2Q8IY57 180 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 MYCT1Q8N699 235 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 MSANTD3Q96H12 275 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 LPIN3Q9BQK8 851 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 ZCWPW1Q9H0M4 648 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 TASP1Q9H6P5 420 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 OBP2AQ9NY56 170 aa13.05□□□□□ -0.32
TFF3-202ENST00000398431 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 TISP43B9A030 160 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 XPOTO43592 962 aaKnown RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 TRAK2O60296 914 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 PRAMEF12O95522 483 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 ATF6P18850 670 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 NMT1P30419 496 aaKnown RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 TNK2Q07912 1038 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 CCINQ13939 588 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 SIM2Q14190 667 aaPredicted RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 MCM6Q14566 821 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 PON2Q15165 354 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 DGKKQ5KSL6 1271 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 ARMCX5Q6P1M9 558 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 C1orf228Q6PIY5 440 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 PRR23BQ6ZRT6 265 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 LONP2Q86WA8 852 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 GPBP1Q86WP2 473 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 CDK5RAP3Q96JB5 506 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 MSTO1Q9BUK6 570 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 BACH2Q9BYV9 841 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 IKZF4Q9H2S9 585 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 SEMA4GQ9NTN9 838 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 CDV3Q9UKY7 258 aaKnown RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 STYXL1Q9Y6J8 313 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 RALGAPA1Q6GYQ0 2036 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
TFF3-202ENST00000398431 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
TFF3-202ENST00000398431 K7ENM7 598 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 SLC30A4O14863 429 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 SLC26A4O43511 780 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 LRP3O75074 770 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
TFF3-202ENST00000398431 ODC1P11926 461 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 PAX3P23760 479 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 HOXA6P31267 233 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 CNR2P34972 360 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 TUFMP49411 452 aaKnown RBP13.03□□□□□ -0.32
TFF3-202ENST00000398431 ACOT2P49753 483 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 CYP4F8P98187 520 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 LRRC32Q14392 662 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 SLC39A12Q504Y0 691 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 ZC2HC1CQ53FD0 456 aaPredicted RBP13.03□□□□□ -0.32
TFF3-202ENST00000398431 PKN3Q6P5Z2 889 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 CRELD2Q6UXH1 353 aaPredicted RBP13.03□□□□□ -0.32
TFF3-202ENST00000398431 TMEM150AQ86TG1 271 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 BPIFB1Q8TDL5 484 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 CHFRQ96EP1 664 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 TMX3Q96JJ7 454 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 AK8Q96MA6 479 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 SMG9Q9H0W8 520 aaKnown RBP13.03□□□□□ -0.32
TFF3-202ENST00000398431 ASB7Q9H672 318 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 RAB23Q9ULC3 237 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 DERAQ9Y315 318 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 DENND4CQ5VZ89 1909 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 ATG2BQ96BY7 2078 aa13.03□□□□□ -0.32
TFF3-202ENST00000398431 TSC2P49815 1807 aa13.02□□□□□ -0.32
TFF3-202ENST00000398431 OTOL1A6NHN0 477 aaPredicted RBP13.02□□□□□ -0.33
TFF3-202ENST00000398431 DPYSL4O14531 572 aa13.02□□□□□ -0.33
TFF3-202ENST00000398431 CYB561D2O14569 222 aa13.02□□□□□ -0.33
TFF3-202ENST00000398431 GDF9O60383 454 aa13.02□□□□□ -0.33
TFF3-202ENST00000398431 KRT37O76014 449 aa13.02□□□□□ -0.33
TFF3-202ENST00000398431 FAM13AO94988 1023 aa13.02□□□□□ -0.33
TFF3-202ENST00000398431 FGF19O95750 216 aa13.02□□□□□ -0.33
TFF3-202ENST00000398431 F11P03951 625 aa13.02□□□□□ -0.33
TFF3-202ENST00000398431 HAPLN1P10915 354 aaPredicted RBP13.02□□□□□ -0.33
TFF3-202ENST00000398431 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
TFF3-202ENST00000398431 SCP2P22307 547 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms