RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 BFSP1Q12934 665 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 SOWAHAQ2M3V2 549 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 COBLL1Q53SF7 1204 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 POTEHQ6S545 545 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 SMYD4Q8IYR2 804 aaPredicted RBP17.97■□□□□ 0.47
APTR-201ENST00000398043 TTC9BQ8N6N2 239 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
APTR-201ENST00000398043 CCDC127Q96BQ5 260 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 PGLYRP2Q96PD5 576 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 CEP72Q9P209 647 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 HSFX1Q9UBD0 423 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 LRRIQ3A6PVS8 624 aaPredicted RBP17.96■□□□□ 0.47
APTR-201ENST00000398043 NRG2O14511 850 aaPredicted RBP17.96■□□□□ 0.47
APTR-201ENST00000398043 GABRDO14764 452 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 MAPK13O15264 365 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 KIF20AO95235 890 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 RHOP08100 348 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 KRT19P08727 400 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 LAMP2P13473 410 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 TNNI1P19237 187 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 SLC5A9Q2M3M2 681 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 TMEM31Q5JXX7 168 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 C1orf220Q5T0J3 134 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 TOP6BLQ8N6T0 577 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 ATAD1Q8NBU5 361 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 ITFG1Q8TB96 612 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 CCDC34Q96HJ3 373 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 HPDLQ96IR7 371 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 FNBP1Q96RU3 617 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 PKMYT1Q99640 499 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 DNAJC25Q9H1X3 360 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 SMOC2Q9H3U7 446 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 POLIQ9UNA4 740 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 SORCS3Q9UPU3 1222 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 YIPF1Q9Y548 306 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 MYH10P35580 1976 aa17.96■□□□□ 0.47
APTR-201ENST00000398043 NUP210Q8TEM1 1887 aaPredicted RBP17.96■□□□□ 0.47
APTR-201ENST00000398043 PRR33A8MZF0 331 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 ANHXE9PGG2 379 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 CALUO43852 315 aaPredicted RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 STAU1O95793 577 aaKnown RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 LRG1P02750 347 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 C4BPAP04003 597 aaKnown RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 PTPN2P17706 415 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 GBP2P32456 591 aaPredicted RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 PRCPP42785 496 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 EPHA5P54756 1037 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 DLG4P78352 724 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 TWF1Q12792 350 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 DUSP4Q13115 394 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 PABPC1LQ4VXU2 614 aaKnown RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 PRSS36Q5K4E3 855 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 ZNF658Q5TYW1 1059 aaPredicted RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 TRIM67Q6ZTA4 783 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 GET4Q7L5D6 327 aaPredicted RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 DPH6Q7L8W6 267 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 OSTM1Q86WC4 334 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 METTL23Q86XA0 190 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 TMEM86AQ8N2M4 240 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 TMC2Q8TDI7 906 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 KBTBD7Q8WVZ9 684 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 ASIC4Q96FT7 647 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 LRRC3Q9BY71 257 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 XYLT2Q9H1B5 865 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 KCNK12Q9HB15 430 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 CDH7Q9ULB5 785 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 SNX9Q9Y5X1 595 aa17.95■□□□□ 0.46
APTR-201ENST00000398043 ZFP37Q9Y6Q3 630 aaPredicted RBP17.95■□□□□ 0.46
APTR-201ENST00000398043 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
APTR-201ENST00000398043 HUS1O60921 280 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 AKAP3O75969 853 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 ANP32AP39687 249 aaKnown RBP17.94■□□□□ 0.46
APTR-201ENST00000398043 CCR2P41597 374 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 MYO1EQ12965 1108 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 SLC39A12Q504Y0 691 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 TDRD10Q5VZ19 366 aaKnown RBP17.94■□□□□ 0.46
APTR-201ENST00000398043 THEM5Q8N1Q8 247 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 FGF13Q92913 245 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 ACBD6Q9BR61 282 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 TMLHEQ9NVH6 421 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 RMND1Q9NWS8 449 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 IGSF9Q9P2J2 1179 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 SLC27A5Q9Y2P5 690 aa17.94■□□□□ 0.46
APTR-201ENST00000398043 HCRTO43612 131 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 MOSPD3O75425 235 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 VNN1O95497 513 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 NR2F2P24468 414 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 AP3M2P53677 418 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 SIGLEC14Q08ET2 396 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 SMARCB1Q12824 385 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 MTMR3Q13615 1198 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 HTR4Q13639 388 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 EDRF1Q3B7T1 1238 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 BMP8AQ7Z5Y6 402 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 NPAS3Q8IXF0 933 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 RSAD2Q8WXG1 361 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 SMARCE1Q969G3 411 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 VRTNQ9H8Y1 702 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 DDX43Q9NXZ2 648 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms