RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 ZNF516Q92618 1163 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 ERCC4Q92889 916 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-201ENST00000398035 ZCWPW1Q9H0M4 648 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 CDH22Q9UJ99 828 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 MAN1B1Q9UKM7 699 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 POLIQ9UNA4 740 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 CLUHO75153 1309 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 ATG2AQ2TAZ0 1938 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 LRRIQ3A6PVS8 624 aaPredicted RBP20.19■□□□□ 0.82
COLCA2-201ENST00000398035 PI4K2BG5E9Z4 385 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 CCL16O15467 120 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 STX10O60499 249 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 AKAP3O75969 853 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 C4BPAP04003 597 aaKnown RBP20.19■□□□□ 0.82
COLCA2-201ENST00000398035 PTPN2P17706 415 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 PCSK1P29120 753 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 MCCD1P59942 119 aaPredicted RBP20.19■□□□□ 0.82
COLCA2-201ENST00000398035 SGSM1Q2NKQ1 1148 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 WDR72Q3MJ13 1102 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 IQCEQ6IPM2 695 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 FOXR2Q6PJQ5 311 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 TAF4BQ92750 862 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 GZF1Q9H116 711 aaPredicted RBP20.19■□□□□ 0.82
COLCA2-201ENST00000398035 KIAA1468Q9P260 1216 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 INSL5Q9Y5Q6 135 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 TCHHQ07283 1943 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 VCANP13611 3396 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 GABRDO14764 452 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 SEC24AO95486 1093 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 EPB41P11171 864 aaKnown RBP20.19■□□□□ 0.82
COLCA2-201ENST00000398035 CCNE1P24864 410 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 ALDH1A3P47895 512 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 MORC3Q14149 939 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 NFE2Q16621 373 aaPredicted RBP20.19■□□□□ 0.82
COLCA2-201ENST00000398035 SOWAHAQ2M3V2 549 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 LIMS2Q7Z4I7 341 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 PLEKHO2Q8TD55 490 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 ZNF512Q96ME7 567 aaPredicted RBP20.19■□□□□ 0.82
COLCA2-201ENST00000398035 MMS19Q96T76 1030 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 C1QTNF1Q9BXJ1 281 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 VRTNQ9H8Y1 702 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 L1RE1Q9UN81 338 aa20.19■□□□□ 0.82
COLCA2-201ENST00000398035 BICDL2A1A5D9 508 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 C2CD4DB7Z1M9 353 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 DCXO43602 365 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 GTF2H1P32780 548 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 TNNC1P63316 161 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 ANKRD40Q6AI12 368 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 SV2AQ7L0J3 742 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 GRASPQ7Z6J2 395 aaPredicted RBP20.18■□□□□ 0.82
COLCA2-201ENST00000398035 ADGRF2Q8IZF7 708 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 LEMD2Q8NC56 503 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 OR10T2Q8NGX3 314 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 SPPL2BQ8TCT7 592 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 AVENQ9NQS1 362 aaPredicted RBP20.18■□□□□ 0.82
COLCA2-201ENST00000398035 DDX43Q9NXZ2 648 aaKnown RBP20.18■□□□□ 0.82
COLCA2-201ENST00000398035 ASB3Q9Y575 518 aa20.18■□□□□ 0.82
COLCA2-201ENST00000398035 ZNF197O14709 1029 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 SLC16A3O15427 465 aaKnown RBP20.17■□□□□ 0.82
COLCA2-201ENST00000398035 TACC1O75410 805 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 OR4Q2P0C623 313 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 P4HA1P13674 534 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 FSHRP23945 695 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 DLG4P78352 724 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 DUSP4Q13115 394 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 NCOA4Q13772 614 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 ZACNQ401N2 412 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 PABPC1LQ4VXU2 614 aaKnown RBP20.17■□□□□ 0.82
COLCA2-201ENST00000398035 SLC39A12Q504Y0 691 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 TDRD10Q5VZ19 366 aaKnown RBP20.17■□□□□ 0.82
COLCA2-201ENST00000398035 ISM2Q6H9L7 571 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 NXPE3Q969Y0 559 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
COLCA2-201ENST00000398035 DNMT3BQ9UBC3 853 aaKnown RBP20.17■□□□□ 0.82
COLCA2-201ENST00000398035 MTMR11A4FU01 709 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 MICAL2O94851 1124 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 GBP2P32456 591 aaPredicted RBP20.16■□□□□ 0.82
COLCA2-201ENST00000398035 EPHB3P54753 998 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 MYL6P60660 151 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 MAPRE1Q15691 268 aaKnown RBP20.16■□□□□ 0.82
COLCA2-201ENST00000398035 CAMK4Q16566 473 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 CYP4A22Q5TCH4 519 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 ATAD1Q8NBU5 361 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 CCDC150Q8NCX0 1101 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 FAM84AQ96KN4 292 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 PGLYRP2Q96PD5 576 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 XYLT2Q9H1B5 865 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 METTL14Q9HCE5 456 aaKnown RBP20.16■□□□□ 0.82
COLCA2-201ENST00000398035 EPS15L1Q9UBC2 864 aa20.16■□□□□ 0.82
COLCA2-201ENST00000398035 WARSP23381 471 aaKnown RBP20.15■□□□□ 0.82
COLCA2-201ENST00000398035 SP100P23497 879 aaPredicted RBP20.15■□□□□ 0.82
COLCA2-201ENST00000398035 GNL1P36915 607 aaPredicted RBP20.15■□□□□ 0.82
COLCA2-201ENST00000398035 TWF1Q12792 350 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 ZNF699Q32M78 642 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 ZNF667Q5HYK9 610 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 SCARA3Q6AZY7 606 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 ITIH5Q86UX2 942 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 ZC3H3Q8IXZ2 948 aaKnown RBP20.15■□□□□ 0.82
COLCA2-201ENST00000398035 CEP63Q96MT8 703 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 IMPG2Q9BZV3 1241 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms