RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ATP4AP20648 1035 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 BGNP21810 368 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 GTF2H1P32780 548 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MYBPC2Q14324 1141 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KPNB1Q14974 876 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 VSTM1Q6UX27 236 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZBTB8OSQ8IWT0 167 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FAM13CQ8NE31 585 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CDKL2Q92772 493 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KREMEN1Q96MU8 473 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 IRAK4Q9NWZ3 460 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PIK3R2O00459 728 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MAP3K6O95382 1288 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CYP1A2P05177 515 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CIITAP33076 1130 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CDH6P55285 790 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 GABPAQ06546 454 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PRKG1Q13976 671 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 WASHC2DQ5SRD0 308 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MAP3K21Q5TCX8 1036 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLFN12LQ6IEE8 588 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MIS18BP1Q6P0N0 1132 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 LRRC6Q86X45 466 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TMEM109Q9BVC6 243 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TMEM120AQ9BXJ8 343 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FEM1BQ9UK73 627 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SCAF8Q9UPN6 1271 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 STARD13Q9Y3M8 1113 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SYNJ2BP-COX16A0A087WUM0 186 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TRIM49D1C9J1S8 452 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 APRTP07741 180 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 WEE2P0C1S8 567 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TM4SF1P30408 202 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CUL3Q13618 768 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NCOA4Q13772 614 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 UBAP2Q5T6F2 1119 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FAXCQ5TGI0 409 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 APOBEC3HQ6NTF7 200 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SPATA24Q86W54 205 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CERS5Q8N5B7 392 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 EXD1Q8NHP7 514 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SCG3Q8WXD2 468 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SHC3Q92529 594 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 COX16Q9P0S2 106 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 A0A1W2PPM1 405 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 AP1G2O75843 785 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MMP10P09238 476 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SFNP31947 248 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PRPF39Q86UA1 669 aaKnown RBP11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ACTL9Q8TC94 416 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 APOL6Q9BWW8 343 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PCMTD2Q9NV79 361 aa11.68□□□□□ -0.54
CSGALNACT1-202ENST00000397998 LOC100653049A0A140TA62 436 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KRT34O76011 436 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 STK10O94804 968 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SNUPNO95149 360 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ASNSP08243 561 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ACADSP16219 412 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CACNA2D1P54289 1103 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 OTUD4Q01804 1114 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ROR1Q01973 937 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 HIC1Q14526 733 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MORF4L2Q15014 288 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PPIL6Q8IXY8 311 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SLC25A41Q8N5S1 370 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 GSDMBQ8TAX9 411 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SPATA18Q8TC71 538 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 AGR3Q8TD06 166 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KLC2Q9H0B6 622 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 Q9H521 79 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SAE1Q9UBE0 346 aaPredicted RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CORO1CQ9ULV4 474 aaPredicted RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CCND2P30279 289 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 YARSP54577 528 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZNF699Q32M78 642 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 EEPD1Q7L9B9 569 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZNF677Q86XU0 584 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZCCHC9Q8N567 271 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 INPP5DQ92835 1189 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SEMA4DQ92854 862 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ABTB1Q969K4 478 aaPredicted RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TARS2Q9BW92 718 aaKnown RBP11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PICK1Q9NRD5 415 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TTLL3Q9Y4R7 772 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SPATA31A5Q5VU36 1347 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SPATA31A7Q8IWB4 1347 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KRT36O76013 467 aa11.67□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CYP24A1Q07973 514 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms